Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_3691 |
Symbol | |
ID | 1185356 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | - |
Start bp | 4158118 |
End bp | 4159659 |
Gene Length | 1542 bp |
Protein Length | 513 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 637395038 |
Product | ea59 protein |
Protein accession | NP_793465 |
Protein GI | 28870846 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG3593] Predicted ATP-dependent endonuclease of the OLD family |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.25413 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGAAACTTT CAATGCAGAT GCTAAAGAAA TCGTCTTTAA TACCGTCTGA CTTAACAGAT ACCTTGCTGT TGGTTGGAAG TGGCTGGGAC GACTACTCAT TCAAAACCAG TTTCACAGTC ATGCACTTCG GTCCGGACGC TAAAAAAACT GAGCTTGGCA CCACCAAGAT TGGATATAAG GACCAGCAGC ACGGATGGAC GTCCGAGAAG TTTTCAACAA AAAATATAAG CCTGAGTGAT GATTTTTTTT CGCTGGGTCA GGATGTCGAT TTTTATAGAA AACTTCAGGG TGGTTTGTCG GCCGACGCAG CGTTGGCTGT CTTGCAGGCG CTCAAAGATG TTATCGCCGA CCCCCTGCGA TTGGAGGACG TTAAGAATGA GCAGGTGTTT CGCGAGTCGC TGATGCGAAA TGTCAGCTGG TCTGTCATCC GTGACCAGTT CAAGCGTGTG CTGGCCGGGA AGCCAGAGCT GACAAGTTTT CATTTTAGTT ACCAGACAAA TGGGGATGAG CAGCGCGCGG GCGTGGACGT GTCGTTTAAA GTAACGCCCC ATTCCTTGCC CTCGACGAAT GTTCATGTAC TCATCGGGCG GAACGGTGTA GGCAAGACAA CAATATTAAA TGACATGGTC GAAACCATTC TCAGCGATAC CACGGGCAGA CCCCATTGCG GAAAATTTTT GATCTATGAT TCGCTGGGCA GTGAACCCAT GCCGACGGAT TATTTTAGCA GTGTTGTTTC TGTGTCTTTT AGCGCGTTTG ATCCATTCTT GTTTCCTGCC GATCAACCCG ATAGAAGTAA AGGTGTCGCT TATTTTTACG TGGGCATGCA ATCCCCGGGG GAAGGCCCTG GTAAGCGCCC CCCGAAGACG ACTGAGGCAT TGACGGAAGA CTTTATAACA AGTCTGGAGT CTTGCTTTAG TCAGGAAAGC AAGCGGCAAA GATGGGTGGC TGCGATCAAG CGTCTCGAAT CTGACAGCAA TTTCGAAGAC ATGGACCTGG CTCATTTAAA TGAGCTTCCC ACGGACGAGG CTATTGTTAA AGCGCATCGT ATTTTTAGCA GGATGAGTTC AGGGCACTCC ATTGTATTGT TGACATTGAC AAAGCTTGTA GAGGCCGTCG AGGAAAAAAC GCTTGTGCTA ATGGATGAGC CTGAAAGTCA TTTGCACCCC CCTTTACTGT CCGCGTTCAC CCGAGCTATT TCTGACCTGC TACAAGACCG GAACGGTGTT GCAATTATCG CAACTCACTC CCCCGTGGTT GTTCAAGAGG CGCCGGGTTC TTGTGTGTGG AAGCTCACCC GACTGCGAGC TGAAGGCAGA GCTGATCGAC CTGAGAGGGA AACGTTCGGT GAGAATGCGG GTGTTCTTAC CCGCGAAATA TTTGGCTTGG AAGTCAATAA ATCGGGTTAC CACGAGGTGT TACAAGAGGC TGTCAATCGT GGAGGGACAT TTGAAAGTAT TTTAGCCGAC TATCAAGAGC AGCTCGGGTT TGAGGCACAG GCAATCTTGC GAAAGATGGT CGCCAGCAGG AGGGAGTCTT GA
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Protein sequence | MKLSMQMLKK SSLIPSDLTD TLLLVGSGWD DYSFKTSFTV MHFGPDAKKT ELGTTKIGYK DQQHGWTSEK FSTKNISLSD DFFSLGQDVD FYRKLQGGLS ADAALAVLQA LKDVIADPLR LEDVKNEQVF RESLMRNVSW SVIRDQFKRV LAGKPELTSF HFSYQTNGDE QRAGVDVSFK VTPHSLPSTN VHVLIGRNGV GKTTILNDMV ETILSDTTGR PHCGKFLIYD SLGSEPMPTD YFSSVVSVSF SAFDPFLFPA DQPDRSKGVA YFYVGMQSPG EGPGKRPPKT TEALTEDFIT SLESCFSQES KRQRWVAAIK RLESDSNFED MDLAHLNELP TDEAIVKAHR IFSRMSSGHS IVLLTLTKLV EAVEEKTLVL MDEPESHLHP PLLSAFTRAI SDLLQDRNGV AIIATHSPVV VQEAPGSCVW KLTRLRAEGR ADRPERETFG ENAGVLTREI FGLEVNKSGY HEVLQEAVNR GGTFESILAD YQEQLGFEAQ AILRKMVASR RES
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