| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_3687 |
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| Symbol | |
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| ID | 1185352 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | - |
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| Start bp | 4153613 |
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| End bp | 4154905 |
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| Gene Length | 1293 bp |
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| Protein Length | 430 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637395034 |
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| Product | L-sorbosone dehydrogenase |
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| Protein accession | NP_793461 |
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| Protein GI | 28870842 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2133] Glucose/sorbosone dehydrogenases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.816344 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGACAGG CCCACGCATT GACTGCATTG AGTATGGCGC TGTTGTTGAG CGCGTGTGGT
GGCGAAGCGG ACAGCACTCA GGCGCGGGGC CCGGCCCCGA AACTGCCCGA GCCGCAACGT
GGCCTGTTGC CGAGCATGAA GATTGCCGAG CCTGTCGCAT GGGGCGATCA AAAACCGACT
GTGCCTGACG GGTTCAGCGT GACTGCGATT GCGACCGACC TGAGCATTCC TCGTCAATCG
ATCGTTCTGC CCAATGGCGA TATTCTCATT GCAGAAGGTC GCGGCGGTAG TGCAGCCAAG
CTCAAGCCGA AGGATGTCAT CGCCAGCGTC ATCAAGGCGC AGGGCAACAC CAAGGTCAAA
GGCGGCAACC GCCTGACGCT GCTGCGTGAT GCGGATGGCG ACGGCAAATA CGAACTGAAG
ACAGTTTTTG CCGAGAACCT CAATGCGCCT TATGGTCTGG CGTTTGCAAA TGGCAAGTTG
TACGTAGCCA ATCAGGATGC GCTGGTCAGC TTCGATTATC AGGACGGCCA GACCAAGGCC
AGCGGCGAGC CGGCCAAGGT GACGGACCTG CCGTCGGCGA TCAACCACCA CTGGACCAAG
GCGCTGACCG TCAGCCCGGA CGGGCGTTTT CTGTACGTCG GCATCGGCTC GAACAGTAAC
GTGACCGAGC GCGGTATGGA GGTCGAGATC GATCGTGCCA TGGTCTGGCA GATCGATGCT
GTGACGGGTG CGCACAAGCC GTATGCGACC GGCTTGCGTA ACCCGACCGC ATTGGCCATT
CAGCCGGGTA CCGGGCAGTT GTGGACAGTG GTCAACGAGC GTGACGAACT GGGTCCTGAC
CTGGTCCCGG ATTACCTGAC GTCGGTGAAA GAGGGCGCCT TTTACGGCTG GCCTTACAGC
TATTGGGGCC AGAACGTGGA TTCACGTGCC CAGCCGCAAA ATCCGGCCAA AGTCGCAGCC
GCGATCAAGC CTGATTACAG CCTGGGCTCG CACGTTGCCG CGCTGGGCGT GTCGTTCTCC
ATGCCGGCCA TGGGTGACAA GTTTGCCGAC GGCGTCTTTG TCGGTGAGCA CGGCAGCTGG
AACCGCGACA ACCCGGTCGG TTACAAGGTG ATTTTCGTAC CGTTCGCCAA TGGACGCCCG
GCCGGTGAGC CAGTGGACTT TGCCACGGGC TTCCGTGGTG CCGATGGCAA GACTCGCGGT
CGGCCAGTGG GCGTCACGGT TGATCCGAAA GGCGCGCTCA TCATCGCCGA CGACCTGGCA
AACACCGTCT GGAGGGTGAC GCGTAACAAA TAG
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| Protein sequence | MRQAHALTAL SMALLLSACG GEADSTQARG PAPKLPEPQR GLLPSMKIAE PVAWGDQKPT
VPDGFSVTAI ATDLSIPRQS IVLPNGDILI AEGRGGSAAK LKPKDVIASV IKAQGNTKVK
GGNRLTLLRD ADGDGKYELK TVFAENLNAP YGLAFANGKL YVANQDALVS FDYQDGQTKA
SGEPAKVTDL PSAINHHWTK ALTVSPDGRF LYVGIGSNSN VTERGMEVEI DRAMVWQIDA
VTGAHKPYAT GLRNPTALAI QPGTGQLWTV VNERDELGPD LVPDYLTSVK EGAFYGWPYS
YWGQNVDSRA QPQNPAKVAA AIKPDYSLGS HVAALGVSFS MPAMGDKFAD GVFVGEHGSW
NRDNPVGYKV IFVPFANGRP AGEPVDFATG FRGADGKTRG RPVGVTVDPK GALIIADDLA
NTVWRVTRNK
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