| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_3686 |
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| Symbol | |
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| ID | 1185351 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | - |
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| Start bp | 4152149 |
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| End bp | 4153348 |
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| Gene Length | 1200 bp |
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| Protein Length | 399 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637395033 |
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| Product | carbohydrate transporter, putative |
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| Protein accession | NP_793460 |
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| Protein GI | 28870841 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAGTCGCT TTGAAACCGC TGGAAACGTC GAAACAAAAC CCGCTTCATG GTGGGCCGTC
GGCAGCGTAT CGCTCGGATC GTTCGCCACC GTCACCACTG AATTCCTGCC TGTAGGGCTG
TTACCCGACA TTGCCGCAGA CCTCGGAACC CGTGTCAGCC ACGCCGGCCT GATGATGGCT
GTTCCCGGCA TCCTTGCGGC CATTTCCGCG CCTTCCTGTA TCGCCCTGTT TAGCCATGTC
GACCGCAAGC GCCTGTTGCT GGGGTTGCTG TCGATACTGC TGGCGTCCAA CCTGATCGTG
GCATTGTCGA GTCAGTTCTG GCTGACCCTT ACCGGCAGGG TATTGCTCGG CTTCGCGTTG
GGAGGCTTCT GGACCATTGC CGGTTCGCTC GGGCCGCGTT TGAGGCCCGG CAAGGAGGGC
GCGAAGGCAA CCGCGTACAT TCTCGCGGGG GTCTCGATTG GCACGGTCGC GGGTATTCCC
GCTGGCACAC TGATCGGCGA AGCTTTCGGC TGGCGAGCTG CGTTTGAAAC GGCAGCGGTC
GTTACCGTTG CCGTGGGCCT GTTGATCGCG GCGTTGCTGC CTGCGTTGCC GGGCGAGCGC
TCTGCCGGTA TCAGCCAGAT GCTGTCGCTG GCCGGCGAGC AAAAGATCCG CCGCATGTTC
GCCGCCGCGC TATTGATCTA CGTCGGGCAT TTTGCGGCCT ACACCTACCT TGCCCCCTTC
GTGCAGGACG CCGCAGACAT CAGAGGCCAG ACACTGGGAT TGTTGCTGTT TGCCTTTGGC
CTCGCAGCCG TCGCCGGCAA CCTGGCTGGC GGGGCACTGG CTGCCCGAAA CGCGCCGTCC
TCGGTGCTGA TCATGACCCT GCTGATGCTC GGGTCGCTGA GTGCGCTGCT GGTATTTGTC
AGCAACCCGT GGCTGCTCTG GCCGGTCATT CTGGTCTGGG GATTTGCCTT CGGGATGATT
CCGATCACCA CGCAAATATG GTGTTTCGAC GCCTCGAACG GACGTGTGGA GGGGGTTCAG
GCGCTGCTGG TGTGTGTGGT GAATCTGTCG ATTGGCGGCG GGGCGTTCAT CGGCGGACTG
GTGTCTGAAG GTGCAGGCTT TACCGCTGCC ATTGTGACTG GCGCGGTGTG TGCCGCGCTG
TCCATGTTAA CGGTAGGGTT CTCGCTGCGC AGGTCAAGAC AGGTCACCTG CACAGAGTGA
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| Protein sequence | MSRFETAGNV ETKPASWWAV GSVSLGSFAT VTTEFLPVGL LPDIAADLGT RVSHAGLMMA
VPGILAAISA PSCIALFSHV DRKRLLLGLL SILLASNLIV ALSSQFWLTL TGRVLLGFAL
GGFWTIAGSL GPRLRPGKEG AKATAYILAG VSIGTVAGIP AGTLIGEAFG WRAAFETAAV
VTVAVGLLIA ALLPALPGER SAGISQMLSL AGEQKIRRMF AAALLIYVGH FAAYTYLAPF
VQDAADIRGQ TLGLLLFAFG LAAVAGNLAG GALAARNAPS SVLIMTLLML GSLSALLVFV
SNPWLLWPVI LVWGFAFGMI PITTQIWCFD ASNGRVEGVQ ALLVCVVNLS IGGGAFIGGL
VSEGAGFTAA IVTGAVCAAL SMLTVGFSLR RSRQVTCTE
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