Gene PSPTO_3675 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_3675 
Symbol 
ID1185340 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand+ 
Start bp4142002 
End bp4143018 
Gene Length1017 bp 
Protein Length338 aa 
Translation table11 
GC content62% 
IMG OID637395022 
Product1-aminocyclopropane-1-carboxylate deaminase 
Protein accessionNP_793449 
Protein GI28870830 
COG category[E] Amino acid transport and metabolism 
COG ID[COG2515] 1-aminocyclopropane-1-carboxylate deaminase 
TIGRFAM ID[TIGR01274] 1-aminocyclopropane-1-carboxylate deaminase 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACCTCA GCAAGTTCAA ACGCTACCCT CTGACCTTCG GCCCCTCGCC CATCACCCCG 
CTGAAACGCT TGAGCGAGCA CCTGGGTGGC AAGGTCGATC TGTACGCCAA GCGCGAAGAC 
TGCAATAGCG GCCTGGCCTT TGGCGGCAAC AAGACCCGCA AGCTGGAATA CCTGGTGCCG 
GAAGCCATCG AGGGCGGCTA CGACACGCTG GTGTCGATCG GCGGCATTCA GTCCAACCAG 
ACCCGCCAGG TGGCGGCAGT CGCGGCGCAT CTGGGCATGA AGTGCGTGCT GGTTCAGGAA 
AACTGGGTCA ACTACTCCGA TGCGCTGTAT GACCGGGTCG GCAACATCGA AATGTCGCGC 
ATCATGGGCG CCGATGTGCG CCTGGACTCG GCCGGTTTTG ATATCGGCAT TCGCCCGAGC 
TGGGAAAAGG CCATGGCCGA TGTAGTCGAA AGCGGCGGCA AGCCGTTCCC GATTCCTGCG 
GGATGTTCGG AACATCCCTA CGGCGGCCTT GGGTTCGTGC GCTTTGCCGA TGAAGTACGC 
CAGCAAGAAG AAGAACTGGG CTTCAAGTTC GACTACATCG TCGTCTGCTC GGTCACCGGC 
AGCACCCACG CCGGTATGCT GGTCGGCTTC GCTGCCGATG GCCGTGCGCA ACGGGTAATC 
GGCATCGACG CCTCGGCCAA ACCGGACAAA ACCCGCGAGC AGGTACTGCG TATCGCCCAG 
AACACCGCAA AACTGGTCGA CCTGGGCCGC GAAATCACCG CCGAAGACGT GGTGCTCGAC 
ACCCGCTACG CCTACCCCGA ATACGGCCTG CCCAACGACG GCACCCTCGA AGCCATACGC 
CTCTGCGCCC GCCTCGAAGG CGTGCTGACC GACCCGGTCT ACGAGGGCAA ATCCATGCAC 
GGCATGATCG ACATGGTCCG CAACGGCGAA TTCCCCGAAG GCTCGAAAGT GCTCTACGCG 
CACCTGGGCG GCGTACCGGC GCTGAACGCG TACAGCTTTT TGTTCAAGGA TGGTTGA
 
Protein sequence
MNLSKFKRYP LTFGPSPITP LKRLSEHLGG KVDLYAKRED CNSGLAFGGN KTRKLEYLVP 
EAIEGGYDTL VSIGGIQSNQ TRQVAAVAAH LGMKCVLVQE NWVNYSDALY DRVGNIEMSR 
IMGADVRLDS AGFDIGIRPS WEKAMADVVE SGGKPFPIPA GCSEHPYGGL GFVRFADEVR 
QQEEELGFKF DYIVVCSVTG STHAGMLVGF AADGRAQRVI GIDASAKPDK TREQVLRIAQ 
NTAKLVDLGR EITAEDVVLD TRYAYPEYGL PNDGTLEAIR LCARLEGVLT DPVYEGKSMH 
GMIDMVRNGE FPEGSKVLYA HLGGVPALNA YSFLFKDG