Gene PSPTO_3672 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_3672 
Symbol 
ID1185337 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand
Start bp4140274 
End bp4141182 
Gene Length909 bp 
Protein Length302 aa 
Translation table11 
GC content60% 
IMG OID637395019 
Producthypothetical protein 
Protein accessionNP_793446 
Protein GI28870827 
COG category[S] Function unknown 
COG ID[COG2354] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.882626 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGGCTGCTG GAAGCTTGCT TACCCTGCTC GACGATATCG CGACCCTGCT GGATGACGTG 
GCGCTGGCCA CCAAGAAAAC AGCGGGCGTG CTGGGTGATG ACCTGGCGCT CAACGCCCAG
CAGGTCACCG GTGTGTCAGC TGATCGTGAA TTGCCTGTGG TCTGGGCGGT GGCCAAGGGT
TCGCTGCTCA ACAAGGCGAT TCTGGTGCCT GCGGCGCTGC TGATCAGTGC GTTCGCGCCT
TGGGCGATTC TGCCTCTGCT GATGATTGGC GGCGCGTTTC TGTGTTTTGA AGGCTTCGAG
AAAATTGCCC ATAAATGGCT GCACCCTGAA GCCGGCGAAG AGCACGACCA GCGCAAGCAG
GCTGCTACGG ATGCGTCAGT GGACATGGTT GCGTTCGAAA AAGAGCGCAT CAAGGGCGCG
ATTCGCACCG ACTTCATTCT TTCGGCGGAA ATCATCGTGC TGGCATTGGG CGTAGTCTCG
GCCCGTCCGT TCATGGATCA GGTCGGCGTT CTGGTCATTG TTGCCGTACT GATTACCGTG
GGCGTTTATG GCCTTGTAGC CGGTATTGTC AAACTTGACG ACCTGGGCCT GCACCTGAAA
AGGACCGCAA GCTCGGTGGC ACAAACTATC GGCAGCGCTT TGCTGTGGCT GGCGCCGGTA
CTGATGAAGG TATTGTCGAT CGTCGGCACT GCGGCGATGT TCATGGTCGG CGGCGGGATT
CTGGTCCACG GCCTGCCGTT CGCTCACCAT TGGGCAGACG GCGTGACCGA GGCTGCATCT
GCTGCTGTGG GTGGCCTTTC GATGATCGTT CCGACCCTGA TCGATGCCAT CGCCGGGATC
ATTGCGGGTG CTGTGCTGGT GCTGATCGTG ACGCTGGTGG GCAAGGTCTG GAAAGCGGCG
AGGGAGTAA
 
Protein sequence
MAAGSLLTLL DDIATLLDDV ALATKKTAGV LGDDLALNAQ QVTGVSADRE LPVVWAVAKG 
SLLNKAILVP AALLISAFAP WAILPLLMIG GAFLCFEGFE KIAHKWLHPE AGEEHDQRKQ
AATDASVDMV AFEKERIKGA IRTDFILSAE IIVLALGVVS ARPFMDQVGV LVIVAVLITV
GVYGLVAGIV KLDDLGLHLK RTASSVAQTI GSALLWLAPV LMKVLSIVGT AAMFMVGGGI
LVHGLPFAHH WADGVTEAAS AAVGGLSMIV PTLIDAIAGI IAGAVLVLIV TLVGKVWKAA
RE