| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_3666 |
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| Symbol | |
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| ID | 1185331 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 4134568 |
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| End bp | 4135497 |
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| Gene Length | 930 bp |
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| Protein Length | 309 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637395013 |
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| Product | polysaccharide deacetylase family protein |
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| Protein accession | NP_793440 |
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| Protein GI | 28870821 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0726] Predicted xylanase/chitin deacetylase |
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| TIGRFAM ID | [TIGR03212] putative urate catabolism protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.854112 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAGCGCTG ACTACCCACG CGACCTGATC GGTTACGGCA GCAACCCGCC TCATCCACGC
TGGCCGGGCG ATGCGCGCAT TGCCTTGTCG TTCGTGCTGA ATTACGAGGA AGGTGGCGAG
CGCAATATTC TGCATGGCGA CAGGGAATCC GAAGCGTTTC TGTCCGAAAT GGTCGCGGCC
CAGCCACTGC AAGGCCAGCG CAACATGAGC ATGGAGTCGC TGTACGAGTA CGGCAGTCGA
GCCGGCGTGT GGCGCATTCT CAAGCTGTTC AAACAGTTCG ACATTCCCCT GACCATCTTC
GCTGTCGCCA TGGCGGCGCA ACGTCACCCG GACGTTATTC GCGCAATGGT CGCCGACGGT
CACGAAATCT GCAGCCACGG TTATCGCTGG ATCGACTACC AGAACATGGA CGAAGCCCAA
GAGCGCGAGC ACATGCGTCA GGCCATTCAG ATTCTGACCG AAATCAGCGG CGAACGCCCA
TTGGGCTGGT ACACCGGCCG CACCGGGGCC AACACACGGC GGCTGGTCAT GGAGGAAGGC
GGCTTTCTTT ATGATTGCGA CACCTACGAC GATGACCTGC CTTACTGGGA GCCGAACAAC
CCGACCGGCA AGCCGCATCT GGTGATCCCG TATACGCTGG ACACCAACGA CATGCGCTTC
ACACAGGTGC AGGGTTTCAA CAACGGCGAG CAGTTTTTCC AGTACCTGAA GGACGCGTTC
GACGTGCTGT ATGCCGAAGG CGAGGACGCG CCGAAGATGC TCTCCATCGG TTTGCACTGC
CGTCTGATTG GCCGCCCTGC CCGGCTCGCC GCACTCAAGC GCTTCATCGA ATACGTCAAA
AGCCATGAGC AGGTGTGGTT CACCCGCCGT GTGGACATCG CCCGCCACTG GCACACGGAA
CATCCCTTTA CCGGCGAGGC CGCGCAATGA
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| Protein sequence | MSADYPRDLI GYGSNPPHPR WPGDARIALS FVLNYEEGGE RNILHGDRES EAFLSEMVAA
QPLQGQRNMS MESLYEYGSR AGVWRILKLF KQFDIPLTIF AVAMAAQRHP DVIRAMVADG
HEICSHGYRW IDYQNMDEAQ EREHMRQAIQ ILTEISGERP LGWYTGRTGA NTRRLVMEEG
GFLYDCDTYD DDLPYWEPNN PTGKPHLVIP YTLDTNDMRF TQVQGFNNGE QFFQYLKDAF
DVLYAEGEDA PKMLSIGLHC RLIGRPARLA ALKRFIEYVK SHEQVWFTRR VDIARHWHTE
HPFTGEAAQ
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