Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_3665 |
Symbol | |
ID | 1185330 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | - |
Start bp | 4133845 |
End bp | 4134216 |
Gene Length | 372 bp |
Protein Length | 123 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 637395012 |
Product | hypothetical protein |
Protein accession | NP_793439 |
Protein GI | 28870820 |
COG category | [R] General function prediction only |
COG ID | [COG2351] Transthyretin-like protein |
TIGRFAM ID | [TIGR02962] hydroxyisourate hydrolase |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCAAGGA GCGAAGTTTT GGGGAAATTG ACCACACACG TACTGGACTC GGCCCACGGC TGCCCGGGCG CTGCCATTCG CGTTGATTTG TATCGGGTGC AAGATCAGCA ATTGCTGCAC ATGGTCAGTG TCGTGACCAA CAGCGATGGT CGCTGCGACG CGCCGTTGTT ACAGGGCGAC GATTATCAGT CCGGCGTGTA CCAGTTGCAC TTTCAGGCAG GCGATTACTA CCGGTCGCGA GGCGTGGTGC TCAATGAGCC GGCGTTTCTG GATGAGGTGG TATTGCGCTT CGGCATTGAT GCAGGTCAGG AACACTTTCA TGTGCCGCTG TTAATCTCGC CTTACAGCTA CTCGACCTAC AGAGGCAGCT GA
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Protein sequence | MARSEVLGKL TTHVLDSAHG CPGAAIRVDL YRVQDQQLLH MVSVVTNSDG RCDAPLLQGD DYQSGVYQLH FQAGDYYRSR GVVLNEPAFL DEVVLRFGID AGQEHFHVPL LISPYSYSTY RGS
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