Gene PSPTO_3655 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_3655 
Symbol 
ID1185320 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand
Start bp4116878 
End bp4118044 
Gene Length1167 bp 
Protein Length388 aa 
Translation table11 
GC content61% 
IMG OID637395002 
Producthypothetical protein 
Protein accessionNP_793429 
Protein GI28870810 
COG category[S] Function unknown 
COG ID[COG4307] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTATCGCT TTTTCGAGCA ATTGAGTTCA CGCATTACCG CCCCATTTGT CGGCGAATCC 
AAACGTAACA GCAAGGTCTG GCAGTGCACC TGCGGCCAGT CGGTGTTTTT CCCCAATTCT
CAATGCCTGG CCTGTTCGGC GGCGCTGGGT TATCTGCCAG AACAGAGCCG GGTGGCTGTA
CTAGAAGCGG GTCCTGATGC CGCGACCTGG CGCTTGAGTG ACGAACCGGG CGCAGGCCTG
TATCGGCGTT GCGCCAACCT CGACACGCCA GCGGCGTGCA ACTGGTTGTT TCCGGCGCAC
AACGCCGGTG AATTCTGCGT GGCATGCAGC CTCAATCGGA CCATTCCCGA CCTGTCCATC
GTCGAAAACG GCGAGCGCTG GCGCAAGGTC GAGACCGCCA AGCGCCGCCT GGTCGCGCAA
TTGATTTCAC TGGGGCTGCA AGTCATCCCC AAGACCGTCG ATGAAGAAAC CGGCCTGGCC
TTTGACTTTG TCGGCGTCGA TCTGGAAGGC AAGCTGCCGA CCACCGGCCA CGCCAATGGC
CTGATCACGC TGAACATCGA AGAAGCCGAC GATGCACACC GCGAAGCCAT GCGCGTGCAG
ATGCACGAAC CGTATCGCAC CTTGCTCGGC CACTTCCGCC ACGAAGTCGG TCACTACTAT
TGGGATCGGC TGATTGCCGA TACCCGCTGG CAGGACGGTT GCCGCAACCT GTTCGGCGAC
GAGCGCGCCA GCTACGCCGA TGCGCTCGAT CACCACTATA AGAACGGCGC GCCCGACAAC
TGGCAGGAAA GCTTCGTCAG TGCCTACGCC ACCATGCACC CGTGGGAAGA CTGGGCCGAA
ACCTGGGCTC ATTACCTGCA CATGATGGAT GCGGTCGATA CCGCGTTGGG CTTTGGCATG
AGCGCCCGCG ACATGGAGCT CGACTACCAG CCATTTCCGC TGGAAGTTCT CTACGATCCA
CAGCACCCCG GCGGCCCGGC GTTCCTGTCG TTCGTCAACG CCTGGATCGA GCTGGCAAGC
ATGCTCAACG AGCTGTCACG CAGCATGGGG CAGCCGGATT TCTATCCGTT CGTGCTGCCG
CCGGCGGTGA TTGCCAAGCT GCACTTCATC CACTTGGTCA TTCAGGATGC AGGCGGCAAG
GCCGATGAGG TCTTGTTGGC TCAATAA
 
Protein sequence
MYRFFEQLSS RITAPFVGES KRNSKVWQCT CGQSVFFPNS QCLACSAALG YLPEQSRVAV 
LEAGPDAATW RLSDEPGAGL YRRCANLDTP AACNWLFPAH NAGEFCVACS LNRTIPDLSI
VENGERWRKV ETAKRRLVAQ LISLGLQVIP KTVDEETGLA FDFVGVDLEG KLPTTGHANG
LITLNIEEAD DAHREAMRVQ MHEPYRTLLG HFRHEVGHYY WDRLIADTRW QDGCRNLFGD
ERASYADALD HHYKNGAPDN WQESFVSAYA TMHPWEDWAE TWAHYLHMMD AVDTALGFGM
SARDMELDYQ PFPLEVLYDP QHPGGPAFLS FVNAWIELAS MLNELSRSMG QPDFYPFVLP
PAVIAKLHFI HLVIQDAGGK ADEVLLAQ