Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_3655 |
Symbol | |
ID | 1185320 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | - |
Start bp | 4116878 |
End bp | 4118044 |
Gene Length | 1167 bp |
Protein Length | 388 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637395002 |
Product | hypothetical protein |
Protein accession | NP_793429 |
Protein GI | 28870810 |
COG category | [S] Function unknown |
COG ID | [COG4307] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTATCGCT TTTTCGAGCA ATTGAGTTCA CGCATTACCG CCCCATTTGT CGGCGAATCC AAACGTAACA GCAAGGTCTG GCAGTGCACC TGCGGCCAGT CGGTGTTTTT CCCCAATTCT CAATGCCTGG CCTGTTCGGC GGCGCTGGGT TATCTGCCAG AACAGAGCCG GGTGGCTGTA CTAGAAGCGG GTCCTGATGC CGCGACCTGG CGCTTGAGTG ACGAACCGGG CGCAGGCCTG TATCGGCGTT GCGCCAACCT CGACACGCCA GCGGCGTGCA ACTGGTTGTT TCCGGCGCAC AACGCCGGTG AATTCTGCGT GGCATGCAGC CTCAATCGGA CCATTCCCGA CCTGTCCATC GTCGAAAACG GCGAGCGCTG GCGCAAGGTC GAGACCGCCA AGCGCCGCCT GGTCGCGCAA TTGATTTCAC TGGGGCTGCA AGTCATCCCC AAGACCGTCG ATGAAGAAAC CGGCCTGGCC TTTGACTTTG TCGGCGTCGA TCTGGAAGGC AAGCTGCCGA CCACCGGCCA CGCCAATGGC CTGATCACGC TGAACATCGA AGAAGCCGAC GATGCACACC GCGAAGCCAT GCGCGTGCAG ATGCACGAAC CGTATCGCAC CTTGCTCGGC CACTTCCGCC ACGAAGTCGG TCACTACTAT TGGGATCGGC TGATTGCCGA TACCCGCTGG CAGGACGGTT GCCGCAACCT GTTCGGCGAC GAGCGCGCCA GCTACGCCGA TGCGCTCGAT CACCACTATA AGAACGGCGC GCCCGACAAC TGGCAGGAAA GCTTCGTCAG TGCCTACGCC ACCATGCACC CGTGGGAAGA CTGGGCCGAA ACCTGGGCTC ATTACCTGCA CATGATGGAT GCGGTCGATA CCGCGTTGGG CTTTGGCATG AGCGCCCGCG ACATGGAGCT CGACTACCAG CCATTTCCGC TGGAAGTTCT CTACGATCCA CAGCACCCCG GCGGCCCGGC GTTCCTGTCG TTCGTCAACG CCTGGATCGA GCTGGCAAGC ATGCTCAACG AGCTGTCACG CAGCATGGGG CAGCCGGATT TCTATCCGTT CGTGCTGCCG CCGGCGGTGA TTGCCAAGCT GCACTTCATC CACTTGGTCA TTCAGGATGC AGGCGGCAAG GCCGATGAGG TCTTGTTGGC TCAATAA
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Protein sequence | MYRFFEQLSS RITAPFVGES KRNSKVWQCT CGQSVFFPNS QCLACSAALG YLPEQSRVAV LEAGPDAATW RLSDEPGAGL YRRCANLDTP AACNWLFPAH NAGEFCVACS LNRTIPDLSI VENGERWRKV ETAKRRLVAQ LISLGLQVIP KTVDEETGLA FDFVGVDLEG KLPTTGHANG LITLNIEEAD DAHREAMRVQ MHEPYRTLLG HFRHEVGHYY WDRLIADTRW QDGCRNLFGD ERASYADALD HHYKNGAPDN WQESFVSAYA TMHPWEDWAE TWAHYLHMMD AVDTALGFGM SARDMELDYQ PFPLEVLYDP QHPGGPAFLS FVNAWIELAS MLNELSRSMG QPDFYPFVLP PAVIAKLHFI HLVIQDAGGK ADEVLLAQ
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