Gene PSPTO_3646 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_3646 
SymboldnaZX 
ID1185311 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand
Start bp4104984 
End bp4107215 
Gene Length2232 bp 
Protein Length743 aa 
Translation table11 
GC content64% 
IMG OID637394994 
ProductDNA polymerase III, subunits gamma and tau 
Protein accessionNP_793421 
Protein GI28870802 
COG category[L] Replication, recombination and repair 
COG ID[COG2812] DNA polymerase III, gamma/tau subunits 
TIGRFAM ID[TIGR02397] DNA polymerase III, subunit gamma and tau 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.923315 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTTATC AGGTTCTTGC ACGTAAATGG CGTCCGCGCT CGTTCCGCGA AATGGTCGGC 
CAGGCCCATG TGCTCAAGGC CCTGATCAAC GCGCTGGACA GCCAGCGCCT GCACCACGCC
TATCTGTTTA CAGGTACGCG AGGCGTCGGC AAGACCACCA TTGCGCGGAT CATCGCCAAG
TGCCTGAACT GCGAAACCGG CATCACCTCG ACGCCCTGCG GCACCTGTTC GGTGTGCAAG
GAGATCGACG AAGGCCGTTT TGTCGACCTG ATCGAGATCG ACGCCGCCAG CCGCACCAAG
GTCGAAGACA CCCGCGAGCT GCTGGACAAC GTGCAGTACG CGCCCAGTCG CGGACGCTTC
AAGGTCTACC TGATCGACGA AGTGCACATG CTCTCCAGCC ACTCGTTCAA TGCCTTGCTC
AAGACGCTTG AAGAGCCGCC GCCCTACGTC AAGTTCATTC TGGCCACCAC TGATCCGCAA
AAGTTGCCGG CGACCATTCT GTCGCGCTGC CTGCAGTTTT CCCTGAAAAA CATGACGCCC
GAGCGCGTTG TCGAGCATCT GACCCACGTG CTGGGCGTCG AAAACGTGCC GTTTGAAGAT
GACGCGCTGT GGTTGCTCGG GCGCGCTGCC GACGGTTCGA TGCGCGATGC CATGAGCCTC
ACCGATCAGG CGATTGCCTT TGGTGAAGGC AAGGTCATGG CGGCCGACGT GCGCGCCATG
CTCGGCACGC TGGATCACGG CCAGGTTTTC GATGTGCTGA CCGCGCTGCT GGAAGGTGAC
GCCCGTGGTG TGCTGGAAGC CGTGCGCCAT CTGGCCGAGC AGGGGCCTGA CTGGAATGGC
GTACTCTCGG AAATTCTCAA CGTGCTGCAC CGCGTGGCAA TTGCCCAGGC GTTGCCCGAA
GGCGTCGACA ACGGCCATGG CGACCGCGAC CGGGTGCTGG CCCTGGCGCA GGCACTGCCC
GCCGAAGACG TGCAGTTTTA TTACCAGATG GGCCTGATCG GCCGTCGTGA CCTGCCGCTG
GCACCGGACC CGCGTGGCGG TTTCGAGATG GTCCTGCTGC GCATGCTGGC GTTTCGTCCG
GCTGACAGCG AAGACGCTCC CAGGCAACCG CTAAAGCCAG TGGGGATCAG CCAGGCCACG
GCTGATTCCC GCAAAACGGT GGCTGATGCG ACACCTGTTG CATCGCCCGC TTCGACGCCG
CCGGTCGTGG CTGCGCCTGA CCCTGCCTTC GAAGCGCAGC CGCCTGCGTA TGCGCCGGCG
CCGGCTGCTG TTCAGCCAGA GGCAAAAGCC GAGCCTGCGC CGCAAATCAA ACCCGAGCCT
GAGCCGCAGC CTGAACCCAA GCCTGCGCCG GTCGAAGAAA TCGATCTGCC GTGGAACGAG
TCGAAAGCGC CGGTGGCCGA AAAGCCTGCC GAGCCCGAGC CCGAGCCCGA GCCCGAGCCC
GATCCTGTGG CAGAAGTTGA AGCAGAGCCC CAGCCTGAGC CGGTAGCCGA ACCGGTTCTG
GAAACGGTTT CCGAGCAGCC GGACCTCACG CCGATGCCAG CCCCTGCGCC CGCCAGCCCC
GTGCCGGATG CGCCGCAGGC CCAGCCGTCG CCGCCGGTTG AGGAACAGCA GGTCACGCCT
GCGATGCTCG AAGCGATTCC TGACTCAGCC TATCTGTCCG CCCCGATGGA CCGCGATGAC
GAACCGCCAG CGGACGACGA TTACGTCGAG CCGGACATCG ACATCGACCC GGCGTCGTAT
AGCTATCTGG ATGAACTGGC CCACGAGAGC GTCGTCGAGC TCGAGGCCGT TGAGCCCGAG
CCTGCTCCGG CCGCCATGCC GGCCACCGGT CTTGCTGCCG ATTGGCTTGA AGTGTTTCCC
AAACTGCCAA TCTCCGGCAT GACCGGCAGC ATCGCCGCCA ACTGCACATT GATGGCGGTC
GATGGCGACA ACTGGCTGCT GCACCTGGAC CCGGCGCACA GCGCGCTGTT CAACTCCACG
CAACAGCGCC GCTTGAACGA TGCGTTGAAC CAGTACCATG GGCGCACGAT CAACCTGAGT
ATCGAGCTGA TCAAGCCCGA GCAGGAAACC CCTGCCCAGG CCGCTTCACG CTTGCGCACC
GAACGCCAGC GTCAGGCCGA AGCCTCGATT CAGGCTGACC CGTACATCCA GCAGATGCTC
CAGCAGTTTG GCGCTGTGAT CCGCGAAGAT ACGATCAAGC CCGTGGACGC GCCGGTGGTG
CAGACTCAAT AA
 
Protein sequence
MSYQVLARKW RPRSFREMVG QAHVLKALIN ALDSQRLHHA YLFTGTRGVG KTTIARIIAK 
CLNCETGITS TPCGTCSVCK EIDEGRFVDL IEIDAASRTK VEDTRELLDN VQYAPSRGRF
KVYLIDEVHM LSSHSFNALL KTLEEPPPYV KFILATTDPQ KLPATILSRC LQFSLKNMTP
ERVVEHLTHV LGVENVPFED DALWLLGRAA DGSMRDAMSL TDQAIAFGEG KVMAADVRAM
LGTLDHGQVF DVLTALLEGD ARGVLEAVRH LAEQGPDWNG VLSEILNVLH RVAIAQALPE
GVDNGHGDRD RVLALAQALP AEDVQFYYQM GLIGRRDLPL APDPRGGFEM VLLRMLAFRP
ADSEDAPRQP LKPVGISQAT ADSRKTVADA TPVASPASTP PVVAAPDPAF EAQPPAYAPA
PAAVQPEAKA EPAPQIKPEP EPQPEPKPAP VEEIDLPWNE SKAPVAEKPA EPEPEPEPEP
DPVAEVEAEP QPEPVAEPVL ETVSEQPDLT PMPAPAPASP VPDAPQAQPS PPVEEQQVTP
AMLEAIPDSA YLSAPMDRDD EPPADDDYVE PDIDIDPASY SYLDELAHES VVELEAVEPE
PAPAAMPATG LAADWLEVFP KLPISGMTGS IAANCTLMAV DGDNWLLHLD PAHSALFNST
QQRRLNDALN QYHGRTINLS IELIKPEQET PAQAASRLRT ERQRQAEASI QADPYIQQML
QQFGAVIRED TIKPVDAPVV QTQ