Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_3643 |
Symbol | |
ID | 1185308 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | + |
Start bp | 4101990 |
End bp | 4102847 |
Gene Length | 858 bp |
Protein Length | 285 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637394991 |
Product | acetyltransferase, GNAT family |
Protein accession | NP_793418 |
Protein GI | 28870799 |
COG category | [R] General function prediction only |
COG ID | [COG3153] Predicted acetyltransferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.631887 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCCACGA CTTCGGACAT CCGCTATCAC TACCGCCCGG CCACTGCCGC AGACACACTG GCAGCCCATG CGCTGTCGGT GCACCTCAAA TGGCCACACC GCGAAGAGGA CTGGGCGATG GTGCAACGCA CCTCGGATGG CTTTGTCGCC GAACATGACG GGCAACTGGT GGGCGTAGCC TTCACCTGTC ATCAGGGCGA CTGGTCGTCG ATTGGCCTGG TGATTGTCAG TGACGAACAT CAGGGCAAAG GCCTCGGTCG TCGCTTGATG AACCTGTGCC TGGACGCCAC CGCGCCCCGC ACGCCGATCC TCAATGCCAC GGAGTCGGGC GCACCGCTCT ACAGGAGCAT GGGTTTCGTT GACTTTGCAC GGATTCAACA GCATCAGGGC ATTGCTCAGG TGCCTGATGC TGAAAGGCTG GGCGAGGGCT TGCCTGTTCG GACACTGGGG CCTGCCGACC ACGCCGAGTT GATCCGCCTG GCTAACGCTG GCAGCGGTCT GGACCGCAGC GTGGTGCTGA CCGATCTGCT GCATGATGCC GAACAGGCGG TGGGTATCGA GCATGATGGC CAGTTGCAAG GTATCGCCCT GCTACGGCGC TTTGGTCGCG GCCATATCAT CGGCCCGGTG GTCGCGCAGG ATGTCGGGCA GGCGCAACGG TTGATCACCC ACTTGCTGCG CCTGATACCC GAGCGGTTTG TGCGTTTCGA CATCATGGCC GACTGCGGGC TCGCGCCGTG GCTGGAAAGC TTGGGCCTGG CGTGTGTCGA CAGAGCGCCG CGCATGGTGC TCGGCACGCC TCCGCCGAAG AGCCCGGACG TGCAGCAGTT TGCGCTGGTG ACTCAGGCGA TTGGCTGA
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Protein sequence | MPTTSDIRYH YRPATAADTL AAHALSVHLK WPHREEDWAM VQRTSDGFVA EHDGQLVGVA FTCHQGDWSS IGLVIVSDEH QGKGLGRRLM NLCLDATAPR TPILNATESG APLYRSMGFV DFARIQQHQG IAQVPDAERL GEGLPVRTLG PADHAELIRL ANAGSGLDRS VVLTDLLHDA EQAVGIEHDG QLQGIALLRR FGRGHIIGPV VAQDVGQAQR LITHLLRLIP ERFVRFDIMA DCGLAPWLES LGLACVDRAP RMVLGTPPPK SPDVQQFALV TQAIG
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