Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_3640 |
Symbol | |
ID | 1185305 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | + |
Start bp | 4099238 |
End bp | 4100374 |
Gene Length | 1137 bp |
Protein Length | 378 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637394989 |
Product | hypothetical protein |
Protein accession | NP_793416 |
Protein GI | 28870797 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG3616] Predicted amino acid aldolase or racemase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCAGCTT TTCTGCCCTC TCTCGATACG CCTGTTGCAC TGCTGGACAT GCCGCGCATG CAGCGCAACA TTCAGCGCAT GCAGCAACGC ATGAATGAAC TGGGCGTGCG CTTGCGCCCG CACGTCAAGA CCAGCAAGTC GCTGCCGGTC ATTCAGGCGC AGATGGCTGC GGGTGCCCGT GGTGTGACGG TCTCGACCCT GAAAGAGGCC GAGCACTGTT TTGCCGAGGG CATCAGCGAC GTGTTTTACG CCGTTGCCAT TGCACCCGGC AAACTGGATC AGGCACTCAA GCTGCGGCGC ATTGGCTGCC GCCTGAGCAT CCTGACCGAC AGCGTGGTCG CAGCACAGGC CATTGTTGCC TTTGGCCAGC AGCACGATGA GCAATTCCAG GTATGGATCG AGATCGATTG CGATGGCCAT CGCTCGGGGC TGACGGTCGA AGACAACGCG TTGATCGAGG TGGCGAGAAC ACTGGTCGAA GGCGGCATGC AACTGCGCGG GGTCATGACC CACGCAGGCT CCAGCTACGA CCTCGACACG CCTGAAGCAC TGCAAGCCCT GGCCGAACAG GAACGCCTGC TCTGCGTCAG CGCCGCCGAA CGCATTCGCC AAGCCGGGCT GCCCTGCCCG GAAGTCAGCA TCGGCTCGAC ACCCACCGCA TTGTCTGCGC AAGGTCTTGC AGGCGTGACC GAGGTGCGCG CGGGCGTGTA TGTGTTCTTC GATCTGGTGA TGCACAACAT CGGCGTGTGC GGTGCAGACG AGCTGGCCTT GAGCGTGCTG ACCACCGTTA TCGGCCATCA GCAGGACAAG GGCTGGGTTA TCGTCGACGC AGGCTGGATG GCCATGAGCC GGGATCGCGG CACCCAGCGC CAGCGTCAGG ATTTCGGTTA CGGCCAGGTC TGCACTGAAA CCGGCGAGTG GATCGATGGC GCGCGAGTGA CCGGGGCCAA TCAGGAGCAC GGCATTATCA CCCTCGCCAC AGGCGACAGC ACAGACATCA CCGGCCGCTT CCCGATTGGC AGCCGGCTGC GCATTCTGCC CAATCACGCG TGCGCGACCG GCGCGCAATT CCCGGACTAT CACGCCTGCG ACGCCGAAGG CGCAGTGCAC ATCTGGAGTC GTCTGCATGG CTGGTGA
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Protein sequence | MSAFLPSLDT PVALLDMPRM QRNIQRMQQR MNELGVRLRP HVKTSKSLPV IQAQMAAGAR GVTVSTLKEA EHCFAEGISD VFYAVAIAPG KLDQALKLRR IGCRLSILTD SVVAAQAIVA FGQQHDEQFQ VWIEIDCDGH RSGLTVEDNA LIEVARTLVE GGMQLRGVMT HAGSSYDLDT PEALQALAEQ ERLLCVSAAE RIRQAGLPCP EVSIGSTPTA LSAQGLAGVT EVRAGVYVFF DLVMHNIGVC GADELALSVL TTVIGHQQDK GWVIVDAGWM AMSRDRGTQR QRQDFGYGQV CTETGEWIDG ARVTGANQEH GIITLATGDS TDITGRFPIG SRLRILPNHA CATGAQFPDY HACDAEGAVH IWSRLHGW
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