Gene PSPTO_3638 details

Gene Information

• Locus tag: PSPTO_3638
• Symbol: recR
• ID: 1185303
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pseudomonas syringae pv. tomato str. DC3000
• Kingdom: Bacteria
• Replicon accession: NC_004578
• Strand: -
• Start bp: 4097544
• End bp: 4098146
• Gene Length: 603 bp
• Protein Length: 200 aa
• Translation table: 11
• GC content: 66%
• IMG OID: 637394987
• Product: recombination protein RecR
• Protein accession: NP_793414
• Protein GI: 28870795
• COG category: [L] Replication, recombination and repair
• COG ID: [COG0353] Recombinational DNA repair protein (RecF pathway)
• TIGRFAM ID: [TIGR00615] recombination protein RecR

Plasmid Coverage information

• Num covering plasmid clones: 19
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGCTTCA GCCCCCTGAT TCGCCAGTTG ATCGATGCCT TCCGCGTGCT GCCGGGCGTA 
GGTCAGAAAA CCGCGCAACG CATGGCGTTG CAGCTGCTGG AGCGCGACCG CAGCGGCGGT 
TCGCGGCTGG CATTGGCGTT GGGGCAGGCA ATGGATGGCG TCGGTCATTG CCGCTTGTGC 
CGCACGCTGA CCGAAGAAGA GCTCTGCCCG CAGTGTTCCG ACCTGCGTCG CAATGACACC 
CTGCTGTGCG TGGTCGAAGG CCCGACGGAT GTCTATGCGG TGGAGCAGAC CGGTTATCGC 
GGTCGTTATT TCGTGCTCAA GGGCCACCTG TCGCCCCTCG ACGGCCTGGG CCCGGAGGCC 
ATCGGCATTC CGCAACTGAT GGAGCGCATC AGCCAGCAGG CCACCTTCAC GGAAGTGATT 
CTGGCCACCA ACCCGACCGT GGAGGGCGAG GCCACCGCGC ACTACATCGC CCAGTTGCTC 
CACGACAAAG GCCTGGTGGC CTCGCGCATT GCCCACGGCG TGCCGCTGGG TGGCGAGCTG 
GACCTGGTTG ACGGCGGCAC CCTGGCGCAC TCGTTTGCCG GGCGCAAACC GATTGCCTTG 
TGA 

 

Protein sequence

MSFSPLIRQL IDAFRVLPGV GQKTAQRMAL QLLERDRSGG SRLALALGQA MDGVGHCRLC 
RTLTEEELCP QCSDLRRNDT LLCVVEGPTD VYAVEQTGYR GRYFVLKGHL SPLDGLGPEA 
IGIPQLMERI SQQATFTEVI LATNPTVEGE ATAHYIAQLL HDKGLVASRI AHGVPLGGEL 
DLVDGGTLAH SFAGRKPIAL