| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_3633 |
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| Symbol | ccmC |
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| ID | 1185298 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | - |
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| Start bp | 4093194 |
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| End bp | 4093997 |
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| Gene Length | 804 bp |
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| Protein Length | 267 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637394982 |
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| Product | heme exporter protein CcmC |
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| Protein accession | NP_793409 |
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| Protein GI | 28870790 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0755] ABC-type transport system involved in cytochrome c biogenesis, permease component |
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| TIGRFAM ID | [TIGR01191] heme exporter protein CcmC |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAAAAGCA ACGCCATGAA AAGCAGCATC GGTTGGGCCT GGTTGCACAG GCTCGGCTCA
CCGAAAGCGT TTTACCGCAT TAGTGCGCGC CTGCTGCCGT GGCTGAGTGT GGCTGCGTGT
CTGTTGCTGG GCATCGGTAT GGTCTGGGGC CTGGCGTTCG CGCCGCCGGA TTACCAGCAG
GGCAACAGTT TTCGGATCAT CTACATTCAC GTGCCTGCCG CCATGCTGGC GCAGTCCTGC
TACGTGATGC TGGCGGTGTG CGGCGTGGTC GGGTTGGTAT GGAAGATCAA ACTGGCCGAC
GTTGCGCTGC ACTGCGCGGC GCCCATCGGG GCGTGGATGA CTGCGCTGGC GTTGGCAACC
GGGGCGATCT GGGGCAAGCC GACCTGGGGC GCCTGGTGGG TCTGGGATGC ACGACTGACT
TCAATGCTGA TTCTGCTGTT CCTGTATCTG GGCCTGATCG CGCTGGGCAA CGCGATCAGC
AATCGCGACA GCGCCGGCAA GGCCTGTGCA GTGCTGGCCA TCGTCGGCGT GGTGAATATT
CCGATCATCA AATACTCGGT CGAGTGGTGG AACACCTTGC ATCAGGGCGC GACGTTCAGC
CTCACGGAGA AACCGGCCAT GCCTGCCGAA ATGTGGCTGC CGCTGCTGTT TACCGTGTTG
GGTTTTTACT GCTTCTTTGG CGTCGTGCTG CTGTTGCGCA TGCGGATTGA AGTGCTGCGT
CGCGAGTCGC GCACCCAGTG GGCAAGGGCC GAGATTCAGC GCAGCCTGGG GCACACGCCG
ACGCCGTTGG AGAACACGCC TTGA
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| Protein sequence | MKSNAMKSSI GWAWLHRLGS PKAFYRISAR LLPWLSVAAC LLLGIGMVWG LAFAPPDYQQ
GNSFRIIYIH VPAAMLAQSC YVMLAVCGVV GLVWKIKLAD VALHCAAPIG AWMTALALAT
GAIWGKPTWG AWWVWDARLT SMLILLFLYL GLIALGNAIS NRDSAGKACA VLAIVGVVNI
PIIKYSVEWW NTLHQGATFS LTEKPAMPAE MWLPLLFTVL GFYCFFGVVL LLRMRIEVLR
RESRTQWARA EIQRSLGHTP TPLENTP
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