| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_3632 |
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| Symbol | ccmD |
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| ID | 1185297 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | - |
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| Start bp | 4093021 |
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| End bp | 4093197 |
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| Gene Length | 177 bp |
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| Protein Length | 58 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637394981 |
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| Product | heme exporter protein CcmD |
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| Protein accession | NP_793408 |
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| Protein GI | 28870789 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3114] Heme exporter protein D |
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| TIGRFAM ID | [TIGR03141] heme exporter protein CcmD |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | TTGAGCTTCG AGTCATTCAG CGATTTTCTC GCAATGGGCC GCCACGGGCT ATTTGTCTGG
TCGGCTTACG GCCTGTGTCT GCTGGTGCTG CTGATCAACG TGGCGTTGCC GGTGCTGGCG
CGGCGGCGTT ATCTGAAGCA ACAGGCGCAA CGCTTGAAGC GGGAGAGCCG GCCGTGA
|
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| Protein sequence | MSFESFSDFL AMGRHGLFVW SAYGLCLLVL LINVALPVLA RRRYLKQQAQ RLKRESRP
|
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