Gene PSPTO_3605 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_3605 
Symbol 
ID1185270 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand- 
Start bp4064916 
End bp4065584 
Gene Length669 bp 
Protein Length222 aa 
Translation table11 
GC content55% 
IMG OID637394957 
Productlyase, putative 
Protein accessionNP_793384 
Protein GI28870765 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.903035 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATCGATC TTGCCACCTG GAATTTGTCC GTACCTGTCG GAGATCCCGC CACCATCATC 
GAAACGCCCA AGCTGCTCAA GGGGTATCGG GACGGTTATT TTCAATCCGG GGACACGCTG 
TTTTTCTGGG CACCGGTGAC CGGTTCAACG ACAGAGAACG CCAAGTACCC GCGCTCCGAG 
TTACGCGAGA CGACGTCCGA TGGCAGAGTC TTCAACTGGG CCTATTCGAG CGCCGACAAT 
TTTCTGCGCG CTACGCTGGA AGTCGATCAG GTGCCTTCCA CCGGCAAAAT CGTGATCGGG 
CAGATTCACT GCTACCAGAG CACCGAGCCG TTGCTGAAGG TGGAGTATCA GTACAAGGAA 
AAACTGAAAA CCGGCAATAT CGTCGCCAAA TTCCGTCGTA CGCCGGATTC TGAAATCGAG 
GTGATTACCA TCGCGCAGGG TGTGCCACTT GATCAGCAGT TCAGCTATAC CATCAACCTG 
TCGCCTTCCG GCGATCTGAC GGTCAGTGCT TTCGACGCGG TCTGGTACGC CAAGCTTGAT 
TCGGCCTGGA GCAGCAAACT GTTCTACTTC AAGGCAGGGG TCTATACCCA GGACAATACC 
GGCTACACCA CCGAGGGCGG TTCGGCGACG TTCTACAAGC TGGCAATCGC TCACGACAAG 
AAGTCCTGA
 
Protein sequence
MIDLATWNLS VPVGDPATII ETPKLLKGYR DGYFQSGDTL FFWAPVTGST TENAKYPRSE 
LRETTSDGRV FNWAYSSADN FLRATLEVDQ VPSTGKIVIG QIHCYQSTEP LLKVEYQYKE 
KLKTGNIVAK FRRTPDSEIE VITIAQGVPL DQQFSYTINL SPSGDLTVSA FDAVWYAKLD 
SAWSSKLFYF KAGVYTQDNT GYTTEGGSAT FYKLAIAHDK KS