Gene PSPTO_3603 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_3603 
Symbol 
ID1185268 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand
Start bp4062841 
End bp4063530 
Gene Length690 bp 
Protein Length229 aa 
Translation table11 
GC content62% 
IMG OID637394955 
ProductDNA-binding heavy metal response regulator 
Protein accessionNP_793382 
Protein GI28870763 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 
TIGRFAM ID[TIGR01387] heavy metal response regulator 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.203952 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCATATCC TGCTGATTGA AGACGACACC AAGACCGGCG AGTACCTGAA GAAGGGCCTG 
GGCGAATCCG GCTATAAGGT GGACTGGACC CAGCACGGCG CCGACGGCCT GCACCTGGCG
CTGGAAAACC GCTACGACCT GATCGTGCTG GACGTGATGT TGCCCGGTAT CGACGGCTGG
CAGATCATCG AAGTGCTGCG CGCCCGGCAG GACGTGCCGG TGTTGTTCCT GACCGCCCGC
GATCAATTGC AGGACCGGAT TCGCGGCCTG GAGCTGGGCG CCGACGATTA CCTGGTCAAG
CCGTTTTCCT TCACTGAACT GCTGCTGCGC ATTCGCACCA TCCTGCGCCG TGGCGTGGTG
CGCGAGGCCG ATCACTTTCA TCTGGCCGAC CTGGAACTCG ACCTGTTGCG CCGCCGCGTG
ACACGTCAGC AACAGGTCAT CGTGCTGACC AACAAGGAGT TCGCCCTGCT GCACCTTTTG
TTGCGCCGCG AAGGCGATGT GCTGTCACGG GCACAGATTG CCTCGGAAGT CTGGGACATG
AATTTCGACA GCGACACCAA TGTAGTGGAC GTCGCCATCA AGCGCCTGCG CAGCAAGGTC
GACCTGCCCT ACCCGGTCAA GCTCATTCAC ACCGTGCGCG GCATCGGTTA TGTGTGCGAG
GTGCGGCCAT GCGACGCCAG CCTTCCCTGA
 
Protein sequence
MHILLIEDDT KTGEYLKKGL GESGYKVDWT QHGADGLHLA LENRYDLIVL DVMLPGIDGW 
QIIEVLRARQ DVPVLFLTAR DQLQDRIRGL ELGADDYLVK PFSFTELLLR IRTILRRGVV
READHFHLAD LELDLLRRRV TRQQQVIVLT NKEFALLHLL LRREGDVLSR AQIASEVWDM
NFDSDTNVVD VAIKRLRSKV DLPYPVKLIH TVRGIGYVCE VRPCDASLP