Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_3592 |
Symbol | |
ID | 1185257 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | - |
Start bp | 4050976 |
End bp | 4052091 |
Gene Length | 1116 bp |
Protein Length | 371 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637394944 |
Product | ATPase, putative |
Protein accession | NP_793371 |
Protein GI | 28870752 |
COG category | [R] General function prediction only |
COG ID | [COG1485] Predicted ATPase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.907313 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGATGCCG TCTCTCCGCT GGATGCTTAT GAACGTGCGG TCCAGCGTGG TTTTCAGCCC GATCAGGCGC AGTTGCAGGC CGTGCAGCAG CTGCAAGCGT GTTACCTGGC GCTGACCGAG TCTCGCGGCC AGGCGCAGGG CGTGTACCTG TGGGGCCCGG TCGGGCGCGG CAAGACCTGG CTGATGGACC GTTTTTTCGA AAGCCTCAAT GTGCCGGCAA GGCGTCAGCA TTTTCATCAC TTCATGCGCT GGGTCCACAA GCGCATGTTC GAACTGATGG GCACGCCCCA GCCGCTGACC GTGGTCGCCA AAGAGCTGGC GCGGGACGTG CGGGTGATGT GTTTCGACGA GCTGTTCGTG ACCGACATCG GTGATGCGGT GATCCTCGGC GGCCTGCTGC AAGTGATGTT CGAGCAGGGC GTGGTGCTGG TTTGCACCTC CAACCAGCCA CCGGACCAGT TGTACAGCCA CGGCCACAAC CGTGAGCGCT TCCTGCCCGC CGTTGCGGCT ATCCAGAAAT ACATGAAGGT CGTGGCGGTG GACGGCGGTG AAGACCATCG CCTGCACCCC GGCCAGTTGC ACCAGCGCTA TTGGGTGGCC CAAGCGGGTC AGCCGAGTGC CCTGCAGGGG ATATTCGAAG CCCTGAGTGC CGGCCAGCCG GTGCACGACT CCCAGGTCAT GCTCGGTTAT CGCAGCATCA ATGTGGTTGA GCATTCCGAC ACGGCGGTGT GGTGCCGCTA TCGCGACCTG TGTGAGCAGC CGCTGGCGGC GATGGACTTT ATCGCGCTGT GCGATCGATT TTCGGTGATC CTGCTCAGCG AAGTGCCGGT TCTGGGCGCT GTGCAGCGCG AGGCGAAGAT TGCCCGTGGC ACCGAAGATG GTGTGGAGCA GGTCACGGCG GGGGATCGTG AACTGCCGCA ACTGTCGCCC AACGACGATG GCGTGCGGCG TTTCATTGCG CTGGTGGATG AGTGCTACGA CCGGCGCATT CCGCTGTACG TCGAAGCGCC AGTGCCGATG GACCAGCTCT ACACCCAGGG TTATCTGTCA TTTGCCTTCC GTCGCACGCT CAGCCGGCTG CAGGAAATGC AACTGGAGCG CTTCACCGAG TCGTGA
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Protein sequence | MDAVSPLDAY ERAVQRGFQP DQAQLQAVQQ LQACYLALTE SRGQAQGVYL WGPVGRGKTW LMDRFFESLN VPARRQHFHH FMRWVHKRMF ELMGTPQPLT VVAKELARDV RVMCFDELFV TDIGDAVILG GLLQVMFEQG VVLVCTSNQP PDQLYSHGHN RERFLPAVAA IQKYMKVVAV DGGEDHRLHP GQLHQRYWVA QAGQPSALQG IFEALSAGQP VHDSQVMLGY RSINVVEHSD TAVWCRYRDL CEQPLAAMDF IALCDRFSVI LLSEVPVLGA VQREAKIARG TEDGVEQVTA GDRELPQLSP NDDGVRRFIA LVDECYDRRI PLYVEAPVPM DQLYTQGYLS FAFRRTLSRL QEMQLERFTE S
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