| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_3588 |
|---|
| Symbol | |
|---|
| ID | 1185253 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_004578 |
|---|
| Strand | + |
|---|
| Start bp | 4047092 |
|---|
| End bp | 4047925 |
|---|
| Gene Length | 834 bp |
|---|
| Protein Length | 277 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 637394940 |
|---|
| Product | phenazine biosynthesis family protein |
|---|
| Protein accession | NP_793367 |
|---|
| Protein GI | 28870748 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0384] Predicted epimerase, PhzC/PhzF homolog |
|---|
| TIGRFAM ID | [TIGR00654] phenazine biosynthesis protein PhzF family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.628545 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACAACCG AAATACTCAA ACTGGCCGCG TTCAGCGATG GCGATCAAGG CGGTAATCCG
GCGGGTGTAT GGCTGGGTGC CTCGCTGCCT GATGAGGTAC GCATGCAGCA GATCGCGGCC
GACGTCGGCT TTTCCGAAAC CGTGTTCGCC GCCCCTCTCG AAAACGGCTG GCGAGTGCGT
TACTTCTCGC CACTGGCCGA AGTGCCGTTC TGCGGTCATG CCACCATTGC GCTGGGTGCC
GTCCTGGCGG CGCAGCAAGG CGACGGTGTG TTCGATCTGA CCCTCAATCA GACACAGATC
ACGGTCGAGG GGCATGCTCA GGGTTCGCTG ACGTCGGCTG CGCTGCAATC GCCGCCCACG
TTCAGCAAAC CGGTCAGCGC GCAGTTGCTG GAAGAAGCGC TGACGCTGTT CGGCTATACG
CACAGCGATC TGGATGAGCG CATCCCGCCA GCGCATATAA ACGGCGGTGC CGGGCATCTG
ATTCTGGCGC TGAACAGCCG CGCAGCGCTC AAGGCCATGC ATTACGACCA ACAGGCCGGG
CGCGAGTTGA TGGTGCGTGA GGGCTGGGCA ACGATTCTGC TGGCCTGGGC AGAAACCGAT
CAGATGTTTC ATACCCGCAA CCCGTTTGCG TTCGGTGGCG TGTACGAAGA TCCGGCCACG
GGCGCAGCTA CGGCGGCGCT GGGCGGTTAT CTGCGTGATG TCGGCTGGCC GCACGGAGGG
TTGATCGACA TCCTGCAAGG CGAAGACATG GGCAGCCCGT CGCGTCTGCG CGCCGAGATC
CCTGAGCAGA TCGGCAGTTC GATCCGGGTT TCAGGAATGG CGCGCAAGTT ATAG
|
|---|
| Protein sequence | MTTEILKLAA FSDGDQGGNP AGVWLGASLP DEVRMQQIAA DVGFSETVFA APLENGWRVR
YFSPLAEVPF CGHATIALGA VLAAQQGDGV FDLTLNQTQI TVEGHAQGSL TSAALQSPPT
FSKPVSAQLL EEALTLFGYT HSDLDERIPP AHINGGAGHL ILALNSRAAL KAMHYDQQAG
RELMVREGWA TILLAWAETD QMFHTRNPFA FGGVYEDPAT GAATAALGGY LRDVGWPHGG
LIDILQGEDM GSPSRLRAEI PEQIGSSIRV SGMARKL
|
|---|
| |