Gene PSPTO_3587 details

Gene Information

• Locus tag: PSPTO_3587
• ID: 1185252
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pseudomonas syringae pv. tomato str. DC3000
• Kingdom: Bacteria
• Replicon accession: NC_004578
• Strand: +
• Start bp: 4046458
• End bp: 4046967
• Gene Length: 510 bp
• Protein Length: 169 aa
• Translation table: 11
• GC content: 60%
• IMG OID: 637394939
• Product: hypothetical protein
• Protein accession: NP_793366
• Protein GI: 28870747
• COG category: [S] Function unknown
• COG ID: [COG4125] Predicted membrane protein

Plasmid Coverage information

• Num covering plasmid clones: 16
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAACGAGC AAAAGGACAG CCTGAACATG ACTCACCGCG AACAGCCCAC ACGTCAGCAA 
CCACCCGTGG TGCATAAAAC TATCCGCGAA CGCGCGCTGC ACGCCACCCT GTTCGAGGTC 
GGCGGCGTGA TTCTGGTCGC GCCGCTGCTG GCCTGGATCA TGAACCAGTC GCTGGCCATG 
ATAGGCATCA TGACGGTGAT GATCTCCACC GTTGCCATGC TCTGGAACAT GGTCTACAAC 
GCCCTGTTCG ACCGGCTGCG GAGCCGATTC GGATTTGCCA TGACGGCCAT GACCCGCATC 
CTCCACGCCA TCGGTTTCGA GGCCGGGCTA ATTCTGGCAG TCGTGCCACT GGCCGCCTGG 
TGGCTGTCGA TCAGCCTGAT GCAGGCATTC TGGCTGGATA TCGGTTTGCT GCTGATGTTT 
CTGCCGTACA CCCTGCTGTT CAACTGGGCC TACGATAACC TGCGCGAGCG GCTGGTCCAG 
CGGCGTATGG CGAGGTGTGA GGTGCTTTGA 

 

Protein sequence

MNEQKDSLNM THREQPTRQQ PPVVHKTIRE RALHATLFEV GGVILVAPLL AWIMNQSLAM 
IGIMTVMIST VAMLWNMVYN ALFDRLRSRF GFAMTAMTRI LHAIGFEAGL ILAVVPLAAW 
WLSISLMQAF WLDIGLLLMF LPYTLLFNWA YDNLRERLVQ RRMARCEVL