| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_3584 |
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| Symbol | |
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| ID | 1185249 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | - |
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| Start bp | 4042719 |
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| End bp | 4044659 |
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| Gene Length | 1941 bp |
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| Protein Length | 646 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637394936 |
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| Product | sensory box histidine kinase/response regulator |
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| Protein accession | NP_793363 |
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| Protein GI | 28870744 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATGAAG GTTTTTGCAT CATCGAGTTC TTCGACGGGC CACATGGCCC GCTGAGTGAT
TACATTCATA TCGAGGCCAA CCCGGCTTAC GAGTACCACG CCGGTATTCC CGATGTGGTC
GGCAAGAAGC TGCGCGAAAT GGTTCGCGAA GAGGCCGATG GCTGGGTGGA GTTCTATGGC
GAGGTGTTGC GTACCGGCAA GCCTGTGCGT TTCGAGCGCG AGCTGGTAGC GACCGGGCGT
TACCTTGCGC TGACGGCTTT TCGCATCGAG CCTGCCAGTC GCAATCAGGT CGCGGTGCTG
TTTCAGGACA TCACCGAGCG CAAGCGTGCC GAACGTGCAC TGCAGCAGCT CAATGAAACG
CTGGAAGCGC GTATCGTCGA GGCAGTTGCC GAGCGTAATG TGCTTGCCAA TGTGGTCAAT
GGCACCAGTG CGTTCATCCA TGTCATCGAC TCCGACTACC GCTGGATGGC CATCAATGGC
TCTGCACTGC GCGAGTTCGA GCGCCTGTTT GGCGTCCGAC CGCAAGTCGG TGACAACATG
CTCGATTTGC TGGATGACCG CCCGATCAGC AAGGCTGGCC TCAAGGAGCG CTGGACGCGT
GCGCTGTCGG GCGAGGAGTT TGCCGAAAGC GTCAGCTTCA GCGATTCAAA TGACCCGGTA
AGACACTTTG AAATGCGCTA CAGCACCCTG CGCAATGCAG ATGGGCAGGC CATTGGCGCT
TACCTGTTTG CGTATGATGT CAGCGAGCGG CGGCGCGAGC AGGAGCGTCT GACCCAGGCC
GAAGAAGCTT TGCGTCAGTC GCAGAAGATG GAGGCTGTCG GCCAGTTGAC GGGCGGTATC
GCCCACGACT TCAATAACTT GCTGACCGGC ATCACCGGCT CGCTGGAACT GCTCAAGACG
CGCCTGAGCC AAGGGCGGTT TACTGAAATA GACCGTTACG TGGCGGCTGC GCAAGATGCC
TCCAAGCGTG CCGCTTCGCT GACTCACCGT CTGCTGGCGT TTTCGCGGCG ACAGACGCTG
GACCCCAAGC CGGTCGATAT CAATCGGCTG GTGATCGGCA TGGAAGAGCT GATTCGGCGT
ACGGTCGGGC CGCACATCAC CCTGGAAGTC GTGACGTCGA TCGGCTTGTG GTCAACGTTC
ATTGATGCGC CGCAACTTGA GAACGCTTTG TTGAACCTGT GCATCAATGC CCGGGATGCA
ATGCCGCGAG GCGGGCGGAT CACTATCGAG ACGGCCAACC GGTGGATTGA CGAGCGCGGC
TCACAGGCCC GTGACCTGTC GCCGGGGCAA TACCTGTCGC TGTGTGTCAG CGATACTGGT
ACCGGCATGT CGCCGGAGGT CATCAATCGG GCGTTCGACC CGTTTTTTAC CACCAAGCCA
TTGGGGCAGG GCACGGGCCT GGGGTTGTCG ATGGTGTACG GCTTTGTGCG TCAGTCCGGC
GGACAGGTGC GCATCTACTC TGAGCCGGAT CAGGGAACGA ACATGTGTCT GTACCTGCCG
CGCCATTACC TTGGAGCCCC TGAGGAAATC GAGGCCGTCG GCACAGACGT TTCACCGCCG
GTGCAGACCG AGCGCACGAT AATGATCGTT GATGACGAAC CGACCATTCG TATGCTGGTT
GCCGAAGTCC TCGAAGACCA GGGTTACATC CCCATCGAGG CGGGAGAGGG CGCGTCGGCA
CTCCGGATTC TGGAGTCGGA TGCAAGGATT GATTTGCTGG TGACCGATGT CGGTCTGCCG
GGCGGCATGA ATGGTCGACA GCTGGCCGAT GCGGCACGAA TCATCCGGCC CGACCTCAAG
GTGCTGTTCA TCACGGGCTA TGCCGAGAAC GCGATAATTG GCAATGGCCA TCTGGATCCG
GGCATGTGGG TGTTGACCAA GCCGTTTACC ATGGAAGCGT TCGCCAGCCG CATTTACGAA
ATGATCGAGC GTGACGACTG A
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| Protein sequence | MDEGFCIIEF FDGPHGPLSD YIHIEANPAY EYHAGIPDVV GKKLREMVRE EADGWVEFYG
EVLRTGKPVR FERELVATGR YLALTAFRIE PASRNQVAVL FQDITERKRA ERALQQLNET
LEARIVEAVA ERNVLANVVN GTSAFIHVID SDYRWMAING SALREFERLF GVRPQVGDNM
LDLLDDRPIS KAGLKERWTR ALSGEEFAES VSFSDSNDPV RHFEMRYSTL RNADGQAIGA
YLFAYDVSER RREQERLTQA EEALRQSQKM EAVGQLTGGI AHDFNNLLTG ITGSLELLKT
RLSQGRFTEI DRYVAAAQDA SKRAASLTHR LLAFSRRQTL DPKPVDINRL VIGMEELIRR
TVGPHITLEV VTSIGLWSTF IDAPQLENAL LNLCINARDA MPRGGRITIE TANRWIDERG
SQARDLSPGQ YLSLCVSDTG TGMSPEVINR AFDPFFTTKP LGQGTGLGLS MVYGFVRQSG
GQVRIYSEPD QGTNMCLYLP RHYLGAPEEI EAVGTDVSPP VQTERTIMIV DDEPTIRMLV
AEVLEDQGYI PIEAGEGASA LRILESDARI DLLVTDVGLP GGMNGRQLAD AARIIRPDLK
VLFITGYAEN AIIGNGHLDP GMWVLTKPFT MEAFASRIYE MIERDD
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