Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_3570 |
Symbol | |
ID | 1185235 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | - |
Start bp | 4027965 |
End bp | 4028558 |
Gene Length | 594 bp |
Protein Length | 197 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 637394922 |
Product | acetyltransferase, GNAT family |
Protein accession | NP_793349 |
Protein GI | 28870730 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG1670] Acetyltransferases, including N-acetylases of ribosomal proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.26082 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTGTGTC TGCGCGGGCG CTGTGTTTTT GTCACCTGCC GCCGCCTGAA TCGACACTCT GCTTACCGAA TCGATCGCGC TTTGTTCAAT TTCTTCAAGA GGTTACCGCC AATGTTCCAC CACCGTCCCC TGGAAGAAAA AGATGTCCCT GTCATCTGCG AACTGCCGCA GAATGCCGAC GAACTGTTTT ACATGTTCCC CAGAGCAAAC TGGCCGCTGA CACCCCCGCA GCTCGCGGAC GCGCTGGAGA CCCGTCAGGA CTCGACGGTC ATCGAGATGG ACGGTGAGGT CGTTGGCTTC GCCAACTTCT CGCAATGCCA CTTTCGCGGC CGCTGCTCGC TGGGCAACGT CATTATCGCG CCCAAGGCCC GCTCCAAAGG GGTAGGCCGT TACATGATCA CCCGCATGAT GGAGATCGCC TTCGACAAGC ACGAAGCCAC CGAGCTCATC GCTTCCTGTT ACAACCACAA CGTGCCGGGG CTGCTGTTTT ACCCGCGCAT GGGCTTTCGC CCTTACTCGA TCGAAGAAAA GCGCGACAAG CAGGGCGCTC GGGTTGCATT GATTCATTTG CGTCTGTCTG GCGAGCAAGC CTGA
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Protein sequence | MLCLRGRCVF VTCRRLNRHS AYRIDRALFN FFKRLPPMFH HRPLEEKDVP VICELPQNAD ELFYMFPRAN WPLTPPQLAD ALETRQDSTV IEMDGEVVGF ANFSQCHFRG RCSLGNVIIA PKARSKGVGR YMITRMMEIA FDKHEATELI ASCYNHNVPG LLFYPRMGFR PYSIEEKRDK QGARVALIHL RLSGEQA
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