| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_3559 |
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| Symbol | glcB-2 |
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| ID | 1185224 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 4016048 |
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| End bp | 4018225 |
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| Gene Length | 2178 bp |
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| Protein Length | 725 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637394911 |
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| Product | malate synthase G |
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| Protein accession | NP_793338 |
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| Protein GI | 28870719 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG2225] Malate synthase |
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| TIGRFAM ID | [TIGR01345] malate synthase G |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.0410584 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCGATT TCGTCAAATG CCAACGCCTC AAGGTAGCCG TCAAGCTGCA ACGTTTTGTC
GATGAAGAAG TGCTGCCCGG CACCGGGCTG GAGCCAGAGG CATTCTGGAA AGGCTTCGAT
GCGCTGGTTC ATGACCTTGC GCCAGTCAAT CGCGAACTGC TCGCCGAACG TGAGCGTTTG
CAGGGCCAAC TGGACAAATG GCACAAGGCG CATCCCGGAC CAATCACCGA CATGCCCGCC
TACCGTGCGT TTCTGCACTC GATTGGCTAC CTGCAGCCCG TGCCGGAACA CGTTGCAGCC
ACTACCGCCA ATGTCGATCT GGAAATCAGC GAGCAGGCTG GCCCGCAACT GGTGGTGCCC
GCCAGCAACG CACGCTATGC GCTGAATGCT GCCAATGCGC GCTGGGGCTC GCTGTACGAC
GCGCTGTATG GCACCGACGT GATCTCGACC AGCAACGGCG CTGAAATCCG CGCCGGGTAC
AATCCGCTGC GCGGCGCCAA GGTCATCGCG TTTGCCCGCG AGCTGCTCGA CACCAGTGCG
CCCCTTGCTA ACGGCAGCCA TAGCGACGCA AACCGCTATC GCATTGAAGA TGGCGAGCTG
CGCATCACCC TGGCGGATGG CAGTCAGACG CTTCTGCAAC ACCCGGAAAA ATACGTCGGT
TTCACAGGTG AGCCTGACCA GCCACAGGCG ATTCTGCTCA AGAATCATGG TCTGCACATC
GAAATCCAAT TCGATCCGCA GCATCCGGTC GGCAAGACCG ATGCCGCCGG CATCAAGGAC
CTGCTGCTGG AATCGGCTCT GTCGACCATC GTCGACTGCG AAGACTCGGT CGCCGCCGTT
GACGCTGACG ACAAGGTGCT GGTCTACCGC AACTGGCTGG GCCTGATGAA AGGCGACCTG
ACCGAAACCC TCGACAAGGG CGGCAAAGCC ATCACCCGCA GCCTCAACCC CGACCGCGTT
TACCACGCCG CAGCCGGTGG TGAACTGACG CTGCGCGGTC GCTCGCTGCT GTTGATTCGC
AACGTCGGCC ACCTGATGAG CAACCCGGCG ATTGTCGACC AGGACGACAA GGAGATTCCC
GAGGGCATTC TCGACGGCGT GATCACCAGC CTGATCGGCC TGCACGACCT GACCCGGCAT
GGCAACTCGC GCGCCGGGAG CATTTACATC GTCAAACCGA AAATGCACGG CGCGGCCGAA
GTGGCGTTTG CCGACCAGTT GTTCAGCCGC ATCGAGGACG TGCTGCACCT GCCACGCAAC
ACCTTGAAGA TGGGCATCAT GGACGAAGAG CGACGCACCA GCGTCAACCT CAAGGCCTGT
ATCAATGCGG CGTCTGCTCG GGTCGCGTTC ATCAACACCG GTTTTCTCGA CCGTACCGGC
GATGAAATTC ACAGCGCCAT GCAGGCAGGC CCTGTGCTGC GCAAGGGCGA GATGAAAAAC
ACGCCGTGGA TCAAGGCCTA CGAGCGCAAC AATGTGCAGG TCGGCCTGGC CTGCGGCTTG
CGCGGCAGGG CGCAGATAGG CAAGGGCATG TGGGCGATGC CCGATCGCAT GGCCGACATG
CTGGAGCAGA AAATCGCTCA TCCGAAATCA GGCGCGACCA CCGCTTGGGT GCCTTCGCCG
ACTGCCGCCA CACTGCATGC GTGGCATTAC CATCATGTCG ATGTGCGTCA GGTTCAGGAG
CAACTCGAGC AACAGTCACT GGTCGATGTC AGCGATCAGT GGCTCGACGA CCTGCTGACC
ATTCCCGTGG TGGGCAAACC CGAGTGGACA CGCGAACAGA TTCTCGAAGA ACTGGAAAAT
AACACCCAGG GCCTGCTGGG CTATGTTGTA CGCTGGGTGG AGCAAGGTAT CGGCTGCTCC
AAGGTGCCGG ATATCCATAA CGTCGGGCTG ATGGAAGACC GGGCGACCCT GCGCATCTCC
AGCCAGCACA TGGCCAACTG GTTGCTGCAC GACATCGCAG GCAAGGAAGA CATACAAAAT
GTGCTGGAGC GCATGGCCAA AGTGGTGGAC AAGCAGAATG CCGGGGATTC GCACTACCGG
CCGATGACCA GGGACTTCAA GAACTCCGCC GCCTTCAAGG CCGCCTGCGC GCTGGTATTC
AAAGGCACGG AGCAGCCTTC GGGCTACACC GAGCCCCTGC TGCATGAGTC CCGGCTTGCG
TTCAAGGATG CCCACTGA
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| Protein sequence | MTDFVKCQRL KVAVKLQRFV DEEVLPGTGL EPEAFWKGFD ALVHDLAPVN RELLAERERL
QGQLDKWHKA HPGPITDMPA YRAFLHSIGY LQPVPEHVAA TTANVDLEIS EQAGPQLVVP
ASNARYALNA ANARWGSLYD ALYGTDVIST SNGAEIRAGY NPLRGAKVIA FARELLDTSA
PLANGSHSDA NRYRIEDGEL RITLADGSQT LLQHPEKYVG FTGEPDQPQA ILLKNHGLHI
EIQFDPQHPV GKTDAAGIKD LLLESALSTI VDCEDSVAAV DADDKVLVYR NWLGLMKGDL
TETLDKGGKA ITRSLNPDRV YHAAAGGELT LRGRSLLLIR NVGHLMSNPA IVDQDDKEIP
EGILDGVITS LIGLHDLTRH GNSRAGSIYI VKPKMHGAAE VAFADQLFSR IEDVLHLPRN
TLKMGIMDEE RRTSVNLKAC INAASARVAF INTGFLDRTG DEIHSAMQAG PVLRKGEMKN
TPWIKAYERN NVQVGLACGL RGRAQIGKGM WAMPDRMADM LEQKIAHPKS GATTAWVPSP
TAATLHAWHY HHVDVRQVQE QLEQQSLVDV SDQWLDDLLT IPVVGKPEWT REQILEELEN
NTQGLLGYVV RWVEQGIGCS KVPDIHNVGL MEDRATLRIS SQHMANWLLH DIAGKEDIQN
VLERMAKVVD KQNAGDSHYR PMTRDFKNSA AFKAACALVF KGTEQPSGYT EPLLHESRLA
FKDAH
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