| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_3558 |
|---|
| Symbol | glcG |
|---|
| ID | 1185223 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_004578 |
|---|
| Strand | + |
|---|
| Start bp | 4015576 |
|---|
| End bp | 4015983 |
|---|
| Gene Length | 408 bp |
|---|
| Protein Length | 135 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 637394910 |
|---|
| Product | glcG protein |
|---|
| Protein accession | NP_793337 |
|---|
| Protein GI | 28870718 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG3193] Uncharacterized protein, possibly involved in utilization of glycolate and propanediol |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.00214965 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAATCA AAGCCGTCCT TACCCAGACC GAAGTCAGCC TGATGCTCGG TGCCGCGCGC
GACGAGGCTC AGGCCAACGG CTGGGCAGTG GCCATCGCTG TCGTGGATGA CGGCGGCCAC
CTGCTGGCAT TCGAGCGCCT GGACGACGCC TCGCCGATCA GCAGTTACAT CTCGATTGAA
AAGGCCCGCA CCTCGGCACT CGGCAAACGC GAGTCCAAGG GCTATGAAGA GATGGTCAAC
GGCGGGCGCA CGGCATTTCT CAGCGCCCCG TTGCTGACCT CGCTGGAGGG CGGCGTGCCG
GTCATCGTCG ACGGTCAGGT GATCGGCGCA GTCGGCGTTT CCGGCGTTAA GGCCGATCAG
GACGCGCAAG TGGCCAAGGC TGGCGTCGCT GCACTGAATG CGGACTGA
|
|---|
| Protein sequence | MKIKAVLTQT EVSLMLGAAR DEAQANGWAV AIAVVDDGGH LLAFERLDDA SPISSYISIE
KARTSALGKR ESKGYEEMVN GGRTAFLSAP LLTSLEGGVP VIVDGQVIGA VGVSGVKADQ
DAQVAKAGVA ALNAD
|
|---|
| |