| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_3556 |
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| Symbol | glcE |
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| ID | 1185221 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 4013245 |
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| End bp | 4014303 |
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| Gene Length | 1059 bp |
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| Protein Length | 352 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637394909 |
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| Product | glycolate oxidase, subunit GlcE |
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| Protein accession | NP_793336 |
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| Protein GI | 28870717 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0277] FAD/FMN-containing dehydrogenases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.084047 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACACAA CGGACAGGGA CGCCAGCCAT ACGCTGCTTG AACAGGTCAA TCAGGCGTTG
CAGGACAATA CGCCGCTGCG CATCCGGGGC GGCAACAGCA AGGCATTTCT CGGTCGTGAG
GTAACAGGCG AACCGCTCGA CACCCGCGCG CATCGCGGCA TTGTCAGCTA TGACCCGACA
GAACTGGTGA TCACTGCCCG CGCCGGTACA CCGCTGAGCG AGGTGTTGCA GGCGCTGGAC
GCCGCAGGGC AGATGCTGCC GTGCGAGCCG CCCGACATTG GCGCGGCGAC ACTCGGCGGC
GTGGTCGCTG CCGGCCTGTC GGGGCCGCGC CGCCCGTGGA GCGGATCGGT GCGTGATTTT
GTGCTCGGCA CACGACTGAT CACAGGCCTC GGCAAGCACC TGCGTTTCGG CGGCGAAGTC
ATGAAAAACG TTGCCGGCTA TGACGTCTCG CGTCTGCTGA CCGGCAGTTT CGGCTGCCTT
GGCGTGTTGA CCGAGGTGTC ACTCAAAGTG CTGCCCAAAC CGCGTCTGTG CAGCAGCATC
GCGCTGGAAA TGGACAGCGC CCGCGCGCTG GCCTGCCTTG CCGAATGGGG TCAGCAACCG
ATGCCGATCA GCGCGGCCAG CCATGACGGT CGCGTGCTGC GGCTACGTCT TGAAGGCGGC
GAAGGCTCGG TGGCAGCCGC GCACGAGCGA CTCGGCGGCG AACTGATCGA CGCGACGTAC
TGGCAGCAGT TGAACGAACA GCGTCTGCCG TTCTTTTTCG ACCCTGGCCC GCTGTGGCGG
GTTTGTGTGC CTGCCGACAC GGGCGTGCTC GACCTGCCGG GCGAACAACT GATCGACTGG
GCCGGCGCAC AGCGCTGGCT GAAATCCGAT GCCAGCGGCG ACGCCATCCG GGCCATGACA
GCCTCGGTCG GCGGGCATGC AACCTGTTAC AGCCAGGGCC GCGACGATAG CCCTTTTCAC
CCCTTGACCA CGCCGCTGCT GCGCTATCAC CAGGCCCTCA AGACCCGGCT CGACCCGCAG
GGCATTTTCA ACCCCGGCCG ACTGTACAGG GAGCTTTGA
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| Protein sequence | MNTTDRDASH TLLEQVNQAL QDNTPLRIRG GNSKAFLGRE VTGEPLDTRA HRGIVSYDPT
ELVITARAGT PLSEVLQALD AAGQMLPCEP PDIGAATLGG VVAAGLSGPR RPWSGSVRDF
VLGTRLITGL GKHLRFGGEV MKNVAGYDVS RLLTGSFGCL GVLTEVSLKV LPKPRLCSSI
ALEMDSARAL ACLAEWGQQP MPISAASHDG RVLRLRLEGG EGSVAAAHER LGGELIDATY
WQQLNEQRLP FFFDPGPLWR VCVPADTGVL DLPGEQLIDW AGAQRWLKSD ASGDAIRAMT
ASVGGHATCY SQGRDDSPFH PLTTPLLRYH QALKTRLDPQ GIFNPGRLYR EL
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