Gene PSPTO_3548 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_3548 
Symbol 
ID1185213 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand- 
Start bp4003986 
End bp4005086 
Gene Length1101 bp 
Protein Length366 aa 
Translation table11 
GC content60% 
IMG OID637394901 
Producthypothetical protein 
Protein accessionNP_793328 
Protein GI28870709 
COG category[R] General function prediction only 
COG ID[COG2220] Predicted Zn-dependent hydrolases of the beta-lactamase fold 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCCTCGA CACACCCGAA AAAGGATGTC TCTTCACTGC CTGTCTTGTC TCGTCACGAG 
GGGCGCTATC AGAATCACAC GCCTATGAAG CCATTAGGCT TTTTTCGCAT GCTCGGCATC 
TTCTGGGATC AGGCATTCAA CAAACCCAGG GACACGCGCC CGGCGGGGGA GATTCCTGTG 
CAACCGCTGT CGCGTCAGCA ATTGCTCGCA GCACCGAACA ACACCGTGTA TCGCCTTGGG 
CATTCGACCG TGCTGCTCAA GTTGCGCAAC CGGTTCTGGC TGACCGACCC GGTGTTTGCC 
GAGCGTGCTT CGCCGGTGCA ATGGGCCGGG CCGCAGCGCT TTCATCAGCC GCCGATCAGC 
CTGGAAGAAC TGCCGCCGAT CACTGGCGTG ATCCTCTCGC ATAACCATTA CGATCATCTT 
GACCATATGG CCATCAAGGC GCTGGTCGAC AAGACCGAGC ACTTCCTCGC ACCGTTGGGC 
GTGGGTGACA AGCTGATCGA ATGGGGCGTG CCTGCGCACA AGGTGCAGCA ACTGGACTGG 
TGGCAGTCCA CAGAGGTGGC GGGCATAACA TTCGTCGCCA CGCCTTCGCA GCATTTTTCG 
GGCCGCACCT TGCGCGACAG CAACCGCAGC TTGTGGGCCT CCTGGGTGAT GATCGATGAC 
GATCAGCGGA TCTTCTTCAG CGGTGACAGC GGCTACTTCG ACGGTTTCAA GACCATTGGT 
GAGCAGTACG GGCCGTTTGA CCTGACCCTG ATGGAAACCG GTGCCTACAA CGTCGAATGG 
CCGCAAGTGC ACATGCAGCC AGAGCAGACC CTGCAGGCCC ACCTTGACCT GCGCGGTCGC 
TGGCTGCTGC CGATTCATAA CGGCACCTTC GACCTGGCGA TGCACGCCTG GCACGAACCG 
TTCGACCGGA TTCTGGCCCT GGCCTGGGAG CAGAATGTGT CGATCACCAC GCCGATGATG 
GGCCAGCCGT TCTATCTGCA ATACCCGTGT CGCGCAATGA CCTGGTGGCT GGGGGTCGAT 
GAAGTGGTCG CGCCCGAGTC AACTCAGGCG CATCCGGCGA GTGGCGAACG GTCCTGTAAC 
TGCCGTCGGC AAAATGCCTG A
 
Protein sequence
MASTHPKKDV SSLPVLSRHE GRYQNHTPMK PLGFFRMLGI FWDQAFNKPR DTRPAGEIPV 
QPLSRQQLLA APNNTVYRLG HSTVLLKLRN RFWLTDPVFA ERASPVQWAG PQRFHQPPIS 
LEELPPITGV ILSHNHYDHL DHMAIKALVD KTEHFLAPLG VGDKLIEWGV PAHKVQQLDW 
WQSTEVAGIT FVATPSQHFS GRTLRDSNRS LWASWVMIDD DQRIFFSGDS GYFDGFKTIG 
EQYGPFDLTL METGAYNVEW PQVHMQPEQT LQAHLDLRGR WLLPIHNGTF DLAMHAWHEP 
FDRILALAWE QNVSITTPMM GQPFYLQYPC RAMTWWLGVD EVVAPESTQA HPASGERSCN 
CRRQNA