Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_3544 |
Symbol | |
ID | 1185209 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | + |
Start bp | 4000561 |
End bp | 4001706 |
Gene Length | 1146 bp |
Protein Length | 381 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 637394897 |
Product | hypothetical protein |
Protein accession | NP_793324 |
Protein GI | 28870705 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.339171 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGCTGCTCG ACACCGACAA GGCTGCGCAG AATCAGCAGA TCACCAGTCA GCAACTGGGC GTCAAGACCG ACAAGCCGTT TACCATCACC CTGCGCACCC TGCACGGTGG TCGTCAGGAA GGCGTGAGCA TCATCGATAT CGATAACGGC ACCATGAAGC TTTCGGTGGT GCCGACCCGT GGCATGAACG TGCTGCAAGC GTCGGTTGGC GATGTGCGCA TGGGTTGGGA TTCGCCGGTC AAGGATGTGG TCAACCCGGC GTTCATCGAG CTCAATGGCC GTGGCGGACT GGGCTGGCTG GAGGGCTTCA ACGAACTGGT CGCGCGCTGC GGCTACGAGT GGGTCGGTCA TCCGGGCATG GACAATGGCG AGTTGCTGAC CCTGCACGGT CGCGCCGCCA ACATTCCGGC CAGCAAGGTC ACGCTGCAGA TCGACGAAAA ACCGCCGTAT GCGATCCGCC TCAAGGGTGA GTTGAAGGAA CAGGCGTTCA AGAAAGTCGA TTTCTCGGTG CAGACCGAAC TGGTCACCGA GCCCGGCAGC ACGAGCTTTT CGCTCAACGA TACGCTGACC AACAACGGCG ATTATCCGAA AGAATACCAG GCGCTCTACC ACAGCAACTT CAGCACGCCG TTCCTGGAAC AGGGCGCGCG TTTTGAAGCG CCGGTCAAAC AGGTCTCGCC GTTCAACGAG AAGGCCAAGG GTGATCTGGG CGACTGGCAG ACTTACCGCG CACCGACGCC GGACTACGAC GAAACGGTCT ATAACATCGT GCCTTATGGC GACGCCAAGG GCGACACCGT CACTGTGCTG CACAACAAGG CCGGCAACCT CGGCGTAGCG GTTGGCTTCA ATACACAGCA ACTGCCGGTG TTCTCGCTGT GGAAAAACAC CGACACCAAA GGCCAGGGTT ACGTGACCGG GCTGGAGCCA GGCACCAGTT TCTCCTACAA CCGCCGCTTT CAGCGCCCGC TGAACCTGGT ACCGACCATC GCGCCCAAAG AGCAACGTCA GTTCCAGATC ACCTACAGCC TGCTGGCTGA CAAGGGTGCC GTCGACAAGA CGCTGGGGCA GATCAAGCGC ATTCAGGACG GTCGCGAGAC CGAAGTGCGC AAAGAGCCGT TGGTGGACCT GACCAAGGAG CAATGA
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Protein sequence | MLLDTDKAAQ NQQITSQQLG VKTDKPFTIT LRTLHGGRQE GVSIIDIDNG TMKLSVVPTR GMNVLQASVG DVRMGWDSPV KDVVNPAFIE LNGRGGLGWL EGFNELVARC GYEWVGHPGM DNGELLTLHG RAANIPASKV TLQIDEKPPY AIRLKGELKE QAFKKVDFSV QTELVTEPGS TSFSLNDTLT NNGDYPKEYQ ALYHSNFSTP FLEQGARFEA PVKQVSPFNE KAKGDLGDWQ TYRAPTPDYD ETVYNIVPYG DAKGDTVTVL HNKAGNLGVA VGFNTQQLPV FSLWKNTDTK GQGYVTGLEP GTSFSYNRRF QRPLNLVPTI APKEQRQFQI TYSLLADKGA VDKTLGQIKR IQDGRETEVR KEPLVDLTKE Q
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