Gene PSPTO_3544 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_3544 
Symbol 
ID1185209 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand
Start bp4000561 
End bp4001706 
Gene Length1146 bp 
Protein Length381 aa 
Translation table11 
GC content60% 
IMG OID637394897 
Producthypothetical protein 
Protein accessionNP_793324 
Protein GI28870705 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.339171 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCTGCTCG ACACCGACAA GGCTGCGCAG AATCAGCAGA TCACCAGTCA GCAACTGGGC 
GTCAAGACCG ACAAGCCGTT TACCATCACC CTGCGCACCC TGCACGGTGG TCGTCAGGAA
GGCGTGAGCA TCATCGATAT CGATAACGGC ACCATGAAGC TTTCGGTGGT GCCGACCCGT
GGCATGAACG TGCTGCAAGC GTCGGTTGGC GATGTGCGCA TGGGTTGGGA TTCGCCGGTC
AAGGATGTGG TCAACCCGGC GTTCATCGAG CTCAATGGCC GTGGCGGACT GGGCTGGCTG
GAGGGCTTCA ACGAACTGGT CGCGCGCTGC GGCTACGAGT GGGTCGGTCA TCCGGGCATG
GACAATGGCG AGTTGCTGAC CCTGCACGGT CGCGCCGCCA ACATTCCGGC CAGCAAGGTC
ACGCTGCAGA TCGACGAAAA ACCGCCGTAT GCGATCCGCC TCAAGGGTGA GTTGAAGGAA
CAGGCGTTCA AGAAAGTCGA TTTCTCGGTG CAGACCGAAC TGGTCACCGA GCCCGGCAGC
ACGAGCTTTT CGCTCAACGA TACGCTGACC AACAACGGCG ATTATCCGAA AGAATACCAG
GCGCTCTACC ACAGCAACTT CAGCACGCCG TTCCTGGAAC AGGGCGCGCG TTTTGAAGCG
CCGGTCAAAC AGGTCTCGCC GTTCAACGAG AAGGCCAAGG GTGATCTGGG CGACTGGCAG
ACTTACCGCG CACCGACGCC GGACTACGAC GAAACGGTCT ATAACATCGT GCCTTATGGC
GACGCCAAGG GCGACACCGT CACTGTGCTG CACAACAAGG CCGGCAACCT CGGCGTAGCG
GTTGGCTTCA ATACACAGCA ACTGCCGGTG TTCTCGCTGT GGAAAAACAC CGACACCAAA
GGCCAGGGTT ACGTGACCGG GCTGGAGCCA GGCACCAGTT TCTCCTACAA CCGCCGCTTT
CAGCGCCCGC TGAACCTGGT ACCGACCATC GCGCCCAAAG AGCAACGTCA GTTCCAGATC
ACCTACAGCC TGCTGGCTGA CAAGGGTGCC GTCGACAAGA CGCTGGGGCA GATCAAGCGC
ATTCAGGACG GTCGCGAGAC CGAAGTGCGC AAAGAGCCGT TGGTGGACCT GACCAAGGAG
CAATGA
 
Protein sequence
MLLDTDKAAQ NQQITSQQLG VKTDKPFTIT LRTLHGGRQE GVSIIDIDNG TMKLSVVPTR 
GMNVLQASVG DVRMGWDSPV KDVVNPAFIE LNGRGGLGWL EGFNELVARC GYEWVGHPGM
DNGELLTLHG RAANIPASKV TLQIDEKPPY AIRLKGELKE QAFKKVDFSV QTELVTEPGS
TSFSLNDTLT NNGDYPKEYQ ALYHSNFSTP FLEQGARFEA PVKQVSPFNE KAKGDLGDWQ
TYRAPTPDYD ETVYNIVPYG DAKGDTVTVL HNKAGNLGVA VGFNTQQLPV FSLWKNTDTK
GQGYVTGLEP GTSFSYNRRF QRPLNLVPTI APKEQRQFQI TYSLLADKGA VDKTLGQIKR
IQDGRETEVR KEPLVDLTKE Q