| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_3522 |
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| Symbol | |
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| ID | 1185187 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 3974297 |
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| End bp | 3976225 |
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| Gene Length | 1929 bp |
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| Protein Length | 642 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637394875 |
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| Product | soluble lytic murein transglycosylase, putative |
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| Protein accession | NP_793302 |
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| Protein GI | 28870683 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0741] Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGCAGTC GTTTGTTCAG CTTTTTATCG TGCCTGCTCC TCTCCACCAC CGCCGTCCAG
ACTGCTCATG CGGTAGACCT CAACCAACAA CGCAAGTATT ACGACGAAGC GAAACGTGCG
CTGGCCAAGG GCGATTCAGG CCCCTATCAG ATGTACAGCA CGGCGCTGGC CGACTATCCG
CTGGAGCCTT ACCTCGAATA CGACGAGTTG ACCGCTCGCC TGAAAACCGC CAGCAATGCG
GAAATCGAGA AGTTTCTTGC CGAGCATGGC GACCTGCCGC AGGCCAACTG GATGAAGCTG
CGCTGGTTGC GCTGGCTGGC AGACCGTGGC GACTGGCAGC CCTTCGTCAA GTATTACGAC
CCGAAGATGA ATTTCGTCGA ACTGGACTGC CTGTACGGGC AGTACCAATT GAACAACAAC
CAGCGCGCCG AAGGTTACGC CAGCGCCGAA AAGCTATGGA TGACCGGCAA AACGTTACCA
GCAGCCTGTG ACGGCTTTTT CGCCCAGTGG GCAGCCGCCG GCCAGCTGAC CGAACAGAAG
CGCTGGCAGC GGGCCAAACT GGCGGCTCAG GCGCGCAACT ACAGCCTGGC CAACACGCTG
GTCAACAGCC TCAATTCCCT GGCACCGCAA GGACGTCTGC TGCTGGCTGT CGCGCAGAAG
CCGGACATGG TCAGCAACCC GGGGCAATTT GCGCCGGTCG ATGAGGCCAT GTCCGACGTG
GTCGGCCTTG GCCTGCGCCG CCTGGCCAAG GACGATCCGC AAAAAGCCCT GTCGATGCTC
GACGGTTACT CGGCGACCAT GCACTTTTCC CGTGAAGAGC AGGTAGAAAT CGCCAAGCAA
ATCGGCCTGA CCCTGGCACG TCGCTACGAC GACCGTGCGC TTGAGGTCAT GACCAAATAT
GATCCAGAAC TGCGCGACAA CACCGTGACT GAGTGGCGCT TGCGTCTGCT GTTGCGCCTC
GGGCGCTGGG AAGAGGCCTA CGAACTGGCG CGCCGCCTGC CCAAGGACCT CGCTGCAACC
AATCGCTGGC GCTATTGGGA AGCGCGCTCC CTGGAACTGG CCCAACCCAA CAGCCCGTTG
ATTGCCTCGC TGTACAAGGA CGTCGCCAAA GAGCGTGACT TCTACGGTTT TCTGGCGGCA
GACCGCACCC AGAGCCCTTA TCAACTCAAC AACAAACCGC TGGTGCTCAG CCAGGCGCTG
ATCAACAAGG TGCGCAACAC GCCAGGTGTG CGTCGCGCGC TGGAGTTTCA TGATCGCGGC
GAAATCGTCG ACGGGCGTCG CGAGTGGTAT CACGTCAGCC GCCTGTTCAG CCGTGATGAA
ATGGTGGCCC AGGCCAAACT GGCTTACGAC CTGAAGTGGT ATTTCCCGGC CATCCGCACG
ATCAGTCAGG CGCAGTACTG GGATGACCTG GACATTCGCT TCCCGATGGC GCACCGCGAC
ACGCTGGTGC GCGAAGCCAA GGTCCGTGGC CTGCACTCAA GCTGGGTGTT CGCCATCATC
CGTCAGGAGA GCGCCTTCAT GGACGACGCT CGCTCGGGCG TCGGTGCCAG CGGCCTGATG
CAACTGATGC CTGCCACCGC CAAGGAAACA GCCCGCAAGT TCAGCATTCC GCTGTCTTCC
CCGCAGCAGG TGCTGGACCC GGACACCAAC ATTCAGCTCG GCGCTGCCTA CCTGAGCTCG
GTGCACGCCC AGTTCAACGG CAATCGCGTG CTCGCCTCCG CTGCCTACAA CGCAGGCCCT
GGGCGCGTGC GTCAATGGCT CAGGGGTGCC AACCATCTGG CCTTCGACGT CTGGGTTGAA
AGCATCCCGT TCGACGAAAC CCGCCAGTAC GTGCAAAACG TGTTGTCTTA TTCGGTGATC
TACGGCCAGA AGCTCAATTC GCCACAGCCG CTGGTGGACT GGCACGAACG TTTCTTCGAC
GATCTGTAA
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| Protein sequence | MRSRLFSFLS CLLLSTTAVQ TAHAVDLNQQ RKYYDEAKRA LAKGDSGPYQ MYSTALADYP
LEPYLEYDEL TARLKTASNA EIEKFLAEHG DLPQANWMKL RWLRWLADRG DWQPFVKYYD
PKMNFVELDC LYGQYQLNNN QRAEGYASAE KLWMTGKTLP AACDGFFAQW AAAGQLTEQK
RWQRAKLAAQ ARNYSLANTL VNSLNSLAPQ GRLLLAVAQK PDMVSNPGQF APVDEAMSDV
VGLGLRRLAK DDPQKALSML DGYSATMHFS REEQVEIAKQ IGLTLARRYD DRALEVMTKY
DPELRDNTVT EWRLRLLLRL GRWEEAYELA RRLPKDLAAT NRWRYWEARS LELAQPNSPL
IASLYKDVAK ERDFYGFLAA DRTQSPYQLN NKPLVLSQAL INKVRNTPGV RRALEFHDRG
EIVDGRREWY HVSRLFSRDE MVAQAKLAYD LKWYFPAIRT ISQAQYWDDL DIRFPMAHRD
TLVREAKVRG LHSSWVFAII RQESAFMDDA RSGVGASGLM QLMPATAKET ARKFSIPLSS
PQQVLDPDTN IQLGAAYLSS VHAQFNGNRV LASAAYNAGP GRVRQWLRGA NHLAFDVWVE
SIPFDETRQY VQNVLSYSVI YGQKLNSPQP LVDWHERFFD DL
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