Gene PSPTO_3520 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_3520 
Symbol 
ID1185185 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand
Start bp3971652 
End bp3972113 
Gene Length462 bp 
Protein Length153 aa 
Translation table11 
GC content58% 
IMG OID637394873 
Productuniversal stress protein family 
Protein accessionNP_793300 
Protein GI28870681 
COG category[T] Signal transduction mechanisms 
COG ID[COG0589] Universal stress protein UspA and related nucleotide-binding proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0564413 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCATACG AACACATTCT GGTTGCCATT GACCTCACCG ATGAGTGTGA TCCGGTCATC 
CGCCGCGCCA GCCTGCTGGC CAAAGCCAGC GGCACAAAGT TGTCGATCGT GCACATCGTC
GAACCTATGG CGATGGCTTT CGGCGGCGAT GTACCCATGG ACCTCTCGCA ATTGCAGCAA
CAGCAATTCG ACCAGGCCAA GGAAAAACTC AAGCAGGTAC AGGACAAATA CAAAGACCTG
GACGTCAAGT GGGGCGAAAG CCACTTGGTC TACGGTCAGC CACGCCAGGA AATCCATCAG
TTGGCGAAGA ATCAGGCATG CGACCTGATC GTCGTCGGCA GCCATGGTCG CCACGGCCTG
GCCTTGCTGC TCGGCTCCAC TGCCAATGAC GTTCTGCACG GTGCGCCTTG CGATGTGCTG
GCAGTGAGCC TCAAAAAAGC GGATGCCCGC AAGCCGGAGT GA
 
Protein sequence
MPYEHILVAI DLTDECDPVI RRASLLAKAS GTKLSIVHIV EPMAMAFGGD VPMDLSQLQQ 
QQFDQAKEKL KQVQDKYKDL DVKWGESHLV YGQPRQEIHQ LAKNQACDLI VVGSHGRHGL
ALLLGSTAND VLHGAPCDVL AVSLKKADAR KPE