Gene PSPTO_3510 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_3510 
SymbollexA-2 
ID1185175 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand
Start bp3961393 
End bp3962001 
Gene Length609 bp 
Protein Length202 aa 
Translation table11 
GC content59% 
IMG OID637394863 
ProductLexA repressor 
Protein accessionNP_793290 
Protein GI28870671 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG1974] SOS-response transcriptional repressors (RecA-mediated autopeptidases) 
TIGRFAM ID[TIGR00498] SOS regulatory protein LexA 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.9651 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATCAAAC TGACGCCACG CCAGGCTGAA ATCCTGGGCT TCATCAAACG CTGCCTGGAA 
GACAACGGCT TCCCGCCTAC CCGTGCGGAA ATCGCTCAGG AACTGGGTTT CAAATCACCC
AACGCAGCGG AAGAGCACCT GAAGGCATTG GCCCGTAAAG GCGCCATCGA GATGACGCCC
GGCGCTTCAC GCGGCATCCG TATCCCCGGC TTCGAGGCAC GCCCCGACGA AAGCAGCCTG
CCGGTCATTG GCCGCGTTGC AGCCGGCGCA CCGATTCTGG CTCAGCAACA TATCGAAGAG
TCCTGCAACA TCAACCCTTC CTTCTTCCAC CCTAGCGCCA ACTACCTGTT GCGCGTTCAC
GGCATGAGCA TGAAGGACGT CGGCATTCTG GATGGCGACC TGCTGGCCGT GCATACCACC
CGCGAGGCCC GCAACGGCCA GATCGTGGTG GCCCGGATAG GCGACGAAGT TACCGTCAAA
CGTTTCAAAC GTGAAGGCAG CAAGGTCTGG CTGCTGGCCG AAAACCCTGA TTTCGCCCCT
ATTGAGGTCG ATCTCAAGGA TCAGGAACTG GTGATCGAAG GTTTGAGCGT CGGCGTCATT
CGCCGCTAA
 
Protein sequence
MIKLTPRQAE ILGFIKRCLE DNGFPPTRAE IAQELGFKSP NAAEEHLKAL ARKGAIEMTP 
GASRGIRIPG FEARPDESSL PVIGRVAAGA PILAQQHIEE SCNINPSFFH PSANYLLRVH
GMSMKDVGIL DGDLLAVHTT REARNGQIVV ARIGDEVTVK RFKREGSKVW LLAENPDFAP
IEVDLKDQEL VIEGLSVGVI RR