| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_3497 |
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| Symbol | mmsA-3 |
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| ID | 1185162 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | - |
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| Start bp | 3948230 |
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| End bp | 3949732 |
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| Gene Length | 1503 bp |
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| Protein Length | 500 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637394850 |
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| Product | methylmalonate-semialdehyde dehydrogenase |
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| Protein accession | NP_793277 |
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| Protein GI | 28870658 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1012] NAD-dependent aldehyde dehydrogenases |
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| TIGRFAM ID | [TIGR01722] methylmalonic acid semialdehyde dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.412544 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCGAGT CACCGGTAAT CGGCCACTAC ATCAATGGAC AGGCGAACAA CGGCGATGGC
GAGCGTTACA GCGACGTCTT CAATCCGGCT ATCGGCACGG TTCAGGCGCG TGTCGCGCTG
GCCAGCGTCA AGACGGTGGA TGAGGCGGTC GCGTCTGCCA AAGCGGCATT TGCCGGCTGG
GCCGATCAGT CGTCGTTGCG CCGGGCGCGG GTGATGTTCA AATTCAAGGA GCTGCTTGAC
CAGCACCATG ACGAGCTGGC GCAGATCATT TGCCGCGAGC ACGGCAAGGT GCTGTCCGAT
GCCCGCGGTG AAGTGGTGCG TGGCATCGAA ATCGTCGAGT TTGCCTGCGG TGCACCCAAC
CTGCTGAAAA GTGATTTCAG CGACAACATT GGCGGTGGTA TCGACAACTG GAACCTGCGC
CAGCCACTGG GCGTCTGCGC CGGGGTCACG CCGTTCAACT TCCCTGTCAT GGTGCCGCTG
TGGATGATCC CCATGGCACT GGTGACCGGC AACTGCTTTA TCCTCAAACC TTCCGAACGT
GATCCGTCGG CCAGCCTGCT GATGGCCCGG CTGTTGAAAG AAGCCGGTTT GCCAGACGGC
GTTTTCAATG TGGTGCAGGG CGACAAGGTA GCGGTCGATG CCTTGCTGCA ACACCCCGAC
ATAGAAGCTG TTTCGTTTGT CGGTTCGACG CCGATTGCCG AGTACATTTA TCAGCAGGGT
ACTTCCCGTG GCAAGCGCGT GCAGGCGTTG GGCGGCGCCA AGAATCACAT GATCGTGATG
CCCGACGCTG ACCTGGATCA AGCCGCCGAC GCGTTGATCG GCGCCGCCTA TGGTTCGGCT
GGCGAGCGTT GCATGGCCAT CTCCATTGCC GTGGTGGTGG GCGACGTGGG CCAGCGCCTG
ATCGACAAGC TGCTACCACG CATTGACCAG CTTAAGGTCG GCAATGGTAT GCAGGCTGAC
TCGGACATGG GGCCGCTGGT CACTGCCGTG CACAAGGCCA AGGTCGAAGG GTTCATCGAT
CAGGGCGTGA AAGAAGGTGC GAAGCTGATT GTCGATGGGC GCAATTTCAG CGTGCCGGGT
GCCGAGCAGG GCTTTTTTGT CGGCGCAACG CTGTTCGACA ACGTCACCCC GCAGATGCAG
ATCTACAAGG AAGAAATCTT CGGTCCGGTG CTGGGCATCG TGCATGTGGC GGATTTCGCC
AGCGCCGTCG AGCTGATCAA TGCCCACGAA TTCGGTAACG GCGTGTCGTG CTTTACCAGC
GATGGCGGCG TGGCCCGTGC GTTCGCACGC ACCATCAAGG TCGGTATGGT TGGCATCAAC
GTGCCGATTC CGGTGCCCAT GGCCTGGCAT TCGTTTGGTG GCTGGAAACG CTCACTGTTC
GGCGACCACC ACGCCTACGG CGAAGAAGGC CTGCGTTTTT ACAGCCGCTA CAAAAGCGTC
ATGCAGCGCT GGCCGGACAG TATTGCCAAA GGGCCGGAAT TCAGTATGCC GACCGCTAAA
TAA
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| Protein sequence | MSESPVIGHY INGQANNGDG ERYSDVFNPA IGTVQARVAL ASVKTVDEAV ASAKAAFAGW
ADQSSLRRAR VMFKFKELLD QHHDELAQII CREHGKVLSD ARGEVVRGIE IVEFACGAPN
LLKSDFSDNI GGGIDNWNLR QPLGVCAGVT PFNFPVMVPL WMIPMALVTG NCFILKPSER
DPSASLLMAR LLKEAGLPDG VFNVVQGDKV AVDALLQHPD IEAVSFVGST PIAEYIYQQG
TSRGKRVQAL GGAKNHMIVM PDADLDQAAD ALIGAAYGSA GERCMAISIA VVVGDVGQRL
IDKLLPRIDQ LKVGNGMQAD SDMGPLVTAV HKAKVEGFID QGVKEGAKLI VDGRNFSVPG
AEQGFFVGAT LFDNVTPQMQ IYKEEIFGPV LGIVHVADFA SAVELINAHE FGNGVSCFTS
DGGVARAFAR TIKVGMVGIN VPIPVPMAWH SFGGWKRSLF GDHHAYGEEG LRFYSRYKSV
MQRWPDSIAK GPEFSMPTAK
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