Gene PSPTO_3494 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_3494 
SymboliolG 
ID1185159 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand
Start bp3944268 
End bp3945278 
Gene Length1011 bp 
Protein Length336 aa 
Translation table11 
GC content61% 
IMG OID637394847 
Productmyo-inositol 2-dehydrogenase 
Protein accessionNP_793274 
Protein GI28870655 
COG category[R] General function prediction only 
COG ID[COG0673] Predicted dehydrogenases and related proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0220757 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCATTGA AACTCGGCGT GATCGGCACA GGCGCAATCG GTCAGGATCA TATCCGGCGT 
TGCAGCAAGA CACTGGTCGG CAGTCAGGTG GTGGCCGTCA CCGACATCAA TCTGGAGCAG
GCAGCCAACG TGGTGCGTGA TCTGGGCATT GGCGCCGAAG TGTATGCCGA CGGGCACGCA
TTGATCGCCG CGCCGGATGT CGAAGCGGTG CTGGTCTGCT CCTGGGGCCC CAGCCATGAA
GAATACGTGC TGGCGGCCAT CGCCGCAGGC AAGCCGGTGT TCTGCGAAAA GCCGCTGGCG
GTCACTGCCG AAGGCTGCCG GCACATCGTC GAAGCCGAGA TCGCCAGTGG CAGGCGTCTG
GTGCAGGTGG GTTTCATGCG CCCGTATGAC CAGGGCTATC GCGCGCTCAA GTCAGTGATC
GACAGCGGCC AGATCGGTGA GCCGCTGATG CTCCATTGCG CCCACCGCAA TCCGCGTGTG
GGCGAGAATT ACAAGACCGA CATGGCCATC ACCGACACCC TCATTCACGA ACTCAATGTG
CTGCGCTGGC TGCTCAATGA CGACTACGTT TCGGTGCAGG TAGTGTTCCC GCGCAAGAGC
GGCAAAGCCC TGGCGCACAT GAAAGACCCG CAGATCGTGA TGCTGGAAAC CGCCCGCGGC
ACGCGCATTG ACGTTGAAGT GTTCGTCAAC TGCCAGTATG GCTACGACAT CCAGTGTGAA
GTGGTTGGCG AGAGCGGCAT TGCCAGACTG CCTGAGCCTT CTCAGGTGCA GTTGCGCAGG
GAGGCCAAAT TGTCCAACGC GATTCTGATG GACTGGAAAG ACCGCTTCAT TGCCGCCTAT
GACGTCGAGT TGCAGGACTT CATCGACGGC GTCAAGGCAG GCACGATCTA CGGCCCTTCC
GCCTGGGACG GCTACGCCGC TGCCGTGGCC GCCGATGCCT GTGTACTGGC ACAGAATAAT
GGCGCTGTGG TGCCGATCAC CCTGGCCATG CGTCCGGCGT TCTATGCCTG A
 
Protein sequence
MALKLGVIGT GAIGQDHIRR CSKTLVGSQV VAVTDINLEQ AANVVRDLGI GAEVYADGHA 
LIAAPDVEAV LVCSWGPSHE EYVLAAIAAG KPVFCEKPLA VTAEGCRHIV EAEIASGRRL
VQVGFMRPYD QGYRALKSVI DSGQIGEPLM LHCAHRNPRV GENYKTDMAI TDTLIHELNV
LRWLLNDDYV SVQVVFPRKS GKALAHMKDP QIVMLETARG TRIDVEVFVN CQYGYDIQCE
VVGESGIARL PEPSQVQLRR EAKLSNAILM DWKDRFIAAY DVELQDFIDG VKAGTIYGPS
AWDGYAAAVA ADACVLAQNN GAVVPITLAM RPAFYA