Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_3483 |
Symbol | |
ID | 1185148 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | + |
Start bp | 3931598 |
End bp | 3932446 |
Gene Length | 849 bp |
Protein Length | 282 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 637394836 |
Product | hypothetical protein |
Protein accession | NP_793263 |
Protein GI | 28870644 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.0228033 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATTACGC CTCATCTTTG GTCGAGCGTA CAAACTAAAC TTGGGTTGTC CCTTTATCTG GTTCTCGACT CCGATGGTCA GCTCGAGGAG CGTGACGCGC TGATCAATTC GATTTCAAAC GACGGGTTCC GGAATTTGTT CTTGGGTACA CCAGCCAATT CTCTGGCAGA CTCCGGCCCT TTCATTTTTC AGCTCGTAGA AGCCGATCTC CTTTTGATTA AGGATTTGAT CAAGAGCCCT GAGCGTAACT GGGGTTGGCT TGCCAGCTCT CCGATTCATG ATATCGAAGT AATCTCGACT CACATGCGTG AGCGTCTTGT GGCCGGCGAG CGGCCAAATC AAGCCATCTA CAGATTCCAC GACAACAGAG TGCTGACTCG CGCCCTGACT CACCTCGATG CCGATCAGTA TCCTGAATAC CTCGGGCCAA TTTCGCGAGT GTGTTACTGG GACGGCTCGC AGTGGGCTGT CACTGAAAAC TCCAATCCTG GCGAACACCC ACTACCAGCC AGTCCTGCGT GGCTGACCAT TCCTCAATCC GAAGTGGCTA GCGCGGCTGT AGAGTTTGAT AATATCCGTC GCTACCTCAT GATTGAGCAC ACCGAGACTC TAGTCAAGCT TGCTGAGCAG GAAAATTTTG ATTCTTGGCT GTGCACACAG CTGGAGCTTG CTCGCACCTG GGGCTGGAAG GAGCCTGAGC AGCTGCACTT CTTTATCACT CAGAGTTTGA AGGCCCCGGA GTATCACCTG CCCAAGTCAT GGTTCCCGCA TAACGCCGAA ACGCCAAAGG CACACTTTGA GCGCATTCAT GAAGAGTCGC TTTACTGGCA AGGCGAGGGC TCGTTATGA
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Protein sequence | MITPHLWSSV QTKLGLSLYL VLDSDGQLEE RDALINSISN DGFRNLFLGT PANSLADSGP FIFQLVEADL LLIKDLIKSP ERNWGWLASS PIHDIEVIST HMRERLVAGE RPNQAIYRFH DNRVLTRALT HLDADQYPEY LGPISRVCYW DGSQWAVTEN SNPGEHPLPA SPAWLTIPQS EVASAAVEFD NIRRYLMIEH TETLVKLAEQ ENFDSWLCTQ LELARTWGWK EPEQLHFFIT QSLKAPEYHL PKSWFPHNAE TPKAHFERIH EESLYWQGEG SL
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