Gene PSPTO_3483 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_3483 
Symbol 
ID1185148 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand
Start bp3931598 
End bp3932446 
Gene Length849 bp 
Protein Length282 aa 
Translation table11 
GC content53% 
IMG OID637394836 
Producthypothetical protein 
Protein accessionNP_793263 
Protein GI28870644 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0228033 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATTACGC CTCATCTTTG GTCGAGCGTA CAAACTAAAC TTGGGTTGTC CCTTTATCTG 
GTTCTCGACT CCGATGGTCA GCTCGAGGAG CGTGACGCGC TGATCAATTC GATTTCAAAC
GACGGGTTCC GGAATTTGTT CTTGGGTACA CCAGCCAATT CTCTGGCAGA CTCCGGCCCT
TTCATTTTTC AGCTCGTAGA AGCCGATCTC CTTTTGATTA AGGATTTGAT CAAGAGCCCT
GAGCGTAACT GGGGTTGGCT TGCCAGCTCT CCGATTCATG ATATCGAAGT AATCTCGACT
CACATGCGTG AGCGTCTTGT GGCCGGCGAG CGGCCAAATC AAGCCATCTA CAGATTCCAC
GACAACAGAG TGCTGACTCG CGCCCTGACT CACCTCGATG CCGATCAGTA TCCTGAATAC
CTCGGGCCAA TTTCGCGAGT GTGTTACTGG GACGGCTCGC AGTGGGCTGT CACTGAAAAC
TCCAATCCTG GCGAACACCC ACTACCAGCC AGTCCTGCGT GGCTGACCAT TCCTCAATCC
GAAGTGGCTA GCGCGGCTGT AGAGTTTGAT AATATCCGTC GCTACCTCAT GATTGAGCAC
ACCGAGACTC TAGTCAAGCT TGCTGAGCAG GAAAATTTTG ATTCTTGGCT GTGCACACAG
CTGGAGCTTG CTCGCACCTG GGGCTGGAAG GAGCCTGAGC AGCTGCACTT CTTTATCACT
CAGAGTTTGA AGGCCCCGGA GTATCACCTG CCCAAGTCAT GGTTCCCGCA TAACGCCGAA
ACGCCAAAGG CACACTTTGA GCGCATTCAT GAAGAGTCGC TTTACTGGCA AGGCGAGGGC
TCGTTATGA
 
Protein sequence
MITPHLWSSV QTKLGLSLYL VLDSDGQLEE RDALINSISN DGFRNLFLGT PANSLADSGP 
FIFQLVEADL LLIKDLIKSP ERNWGWLASS PIHDIEVIST HMRERLVAGE RPNQAIYRFH
DNRVLTRALT HLDADQYPEY LGPISRVCYW DGSQWAVTEN SNPGEHPLPA SPAWLTIPQS
EVASAAVEFD NIRRYLMIEH TETLVKLAEQ ENFDSWLCTQ LELARTWGWK EPEQLHFFIT
QSLKAPEYHL PKSWFPHNAE TPKAHFERIH EESLYWQGEG SL