Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_3478 |
Symbol | |
ID | 1185143 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | + |
Start bp | 3924946 |
End bp | 3925185 |
Gene Length | 240 bp |
Protein Length | 79 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 637394831 |
Product | hypothetical protein |
Protein accession | NP_793258 |
Protein GI | 28870639 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.111592 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAACTGA CCACAAACAC GCTGAAAGAC TTGTTCGATC AATTGGGGCT CGACTCCGAC GACCACAGCA TCGATGAATT CGTCGCCAAC CACCAACTGC CCAATGAAGT GAAAGTGGTC GAGGCCGATT TCTGGTCAGA ATCGCAGGCC AGATTCCTGA AAGAAGAACT GCACAAGGAT GCCGAATGGG CGCCTGTGAT CGACGACCTG AATGTGCTCT TGCATGACGC GCCTGAGTGA
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Protein sequence | MELTTNTLKD LFDQLGLDSD DHSIDEFVAN HQLPNEVKVV EADFWSESQA RFLKEELHKD AEWAPVIDDL NVLLHDAPE
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