| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_3471 |
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| Symbol | |
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| ID | 1185136 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 3917931 |
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| End bp | 3920849 |
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| Gene Length | 2919 bp |
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| Protein Length | 972 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637394824 |
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| Product | monovalent cation:proton antiporter, putative |
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| Protein accession | NP_793251 |
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| Protein GI | 28870632 |
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| COG category | [C] Energy production and conversion
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG1009] NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit
[COG2111] Multisubunit Na+/H+ antiporter, MnhB subunit |
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| TIGRFAM ID | [TIGR00940] Tmonovalent cation:proton antiporter
[TIGR00943] monovalent cation:proton antiporter |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.665295 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCCCTGA TAGTTCTACT GCTTCTGCCC TTCATTGGCA GCTGTCTGGC GGCCATTTTG
CCGCACAACG CGCGTAACGC AGAATCGTTT CTGGCGGGTC TGGTCGCCTT GATCGGGGCG
ATCCAGATGG CGTTGTGGTT CCCGCAGATC GCCGACGGCG GCGTGATTCG CGAGGAATAT
TTCTGGCTGC CAAGCCTTGG GATGAATTTC GTTCTACGCA TCGACGGCTT CGCCTGGCTG
TTTTCGATGC TGGTGCTGGG CATCGGTGCG CTGGTGTCGC TCTACGCCCG CTATTACATG
TCGCCGGACG ATCCGGTGCC GCGCTTCTTC GCTTTTTTCC TGGCGTTCAT GGGTGCCATG
CTCGGGCTGG TCATGTCCGG CAACCTGATT CAGATCGTGT TTTTCTGGGA GCTGACCAGC
CTGTTTTCGT TTCTGCTGAT CGGCTACTGG CATCATCGCG CCGATGCACG CCGTGGCGCG
TACATGGCGC TGATGGTCAC CGGCGCAGGC GGGCTGGCAC TGCTGGCGGG CATGATGATC
CTGGGGCATG TGGCAGGCAG TTACGATCTG GACCGTGTGC TGGCCTCCGG TGACGCGATT
CGCGCCCATG CCTTGTACCC GGTATTGCTG ACCCTGATTC TGATCGGCGC ATTGACCAAA
AGCGCGCAGT TCCCGTTCCA TTTCTGGCTG CCCCACGCCA TGGCGGCGCC CACACCGGTT
TCGGCTTATC TACACTCGGC GACCATGGTC AAGGCCGGGG TGTTTCTCAT GGCGCGGATG
TGGCCCGCGC TGTCCGGCAC CGAGCAATGG TTCTGGATCG TCAGCGGCGC GGGTGCCTGC
ACGCTGATTC TGGGCGCCTA TGCAGCCATC TTTCAGAATG ACCTCAAAGG ACTGCTGGCG
TACTCGACCA TCAGCCACCT GGGCCTGATC ACACTGCTGC TGGGTCTGAA CAGCCCGCTG
GCAGCCGTCG CTGCGGTGTT CCATATTCTC AACCATGCCA CCTTCAAAGC CTCGCTGTTC
ATGGCGGCCG GGATCATCGA CCACGAGAGC GGGACCCGAG ATATCCGGCG GCTCAGCGGG
CTGGTGAAGC TGCTTCCCTA TACCGCGACG CTGGCAATGG TCGCCAGCGC ATCGATGGCC
GGCGTGCCGC TGCTCAACGG GTTCCTGTCC AAGGAAATGT TCTTTGCCGA GACGGTGTTC
ATTTCCGCCA CGGCCTGGGT CGAGATCGCG CTGCCTGTCA TCGCGACCAT TGCCGGTATA
TTCAGTGTCG CCTATTCGCT GCGCTTCACG GTCGATGTGT TTTTCGGACC GGCAGCCAAA
GACCTGCCGC ACTTGCCCCA TGAGCCGCCG CGCTGGATGC GTGCGCCGGT CGAACTGTTG
GTGCTGACGT GCCTGGTCGT CGGCATATTC CCGGCGCAGT CCGTCGCGCC TCTGCTGGCA
GCCGCTGCAC GCCCGGTGGT GGGCGGAACA CTGCCCCAGT ACAGCCTGGC GATCTGGCAT
GGCTGGAATC TGCCGATGGT CATAAGCCTG GTGGCGATGG CGGGCGGCAT CATTCTGTAC
CTATTGCTGC GCAAGCCCCT CAAGCACGAA CGCATCACCA CCCCGCCGCT GGTGGGACGT
CTCAACGGCA AACGCTTCTT CGAGCGCAGC CTGGTTGTCG TCATGCACTG GGCGCGGCGT
TTCGAGCGCA AGGTCAGTAC GCGTCGTTTG CAGCCGCAAT TGTTTCTGCT GGTGCTGGCG
GCGGTGCTGG GCGGCTTCAT TCCAATGTAT TTCAGCGGCC TGACTTGGGG CGACCGGCCA
AAAATTCCGG GCTCCGGGGT ATTTGTCACG CTCTGGCTGA TCGCGATTGC CTGCGCCATC
GGTGCGGCAT GGCAGGGTAA ATATCACCGT CTGGCAGCAT TGGTCATGGT CAGCGTGTGC
GGCCTGATGA CGTGCATCAC CTTTGTCTGG TTCTCGGCAC CTGATCTGGC GCTGACACAG
CTGGTCGTGG AAGTGGTGAC CACGGTGCTG ATTCTGCTCG GTCTGCGCTG GCTGCCGCGA
CGCAACGAAG ACGTCGCACC GCTCAGTGCC CGCCTGCGCG CTCGCACCCG GCGGATACGC
GACTTTGGCC TGGCGGTGCT GGTCGGGCTG GGAATGGCGA TACTGTCCTA CGCCATGCTC
ACTCGGCAGA CGCCCAACGC CATCTCGTCG TTCTACCTGA GCCGCGCGCT GCCACAGGGC
GGCGGCACCA ACGTGGTCAA CGTGATGCTG GTGGATTTCC GTGGCTTCGA CACGTTCGGC
GAAATCACCG TGCTGGCCGC CGTGGCGCTC ACGGTATTTG CCTTGCTGCG GCGCTTCCGC
CCACCGAAAG AAAGCATTCT GCTGCCGACC CAACAGCGCC TGCTCGCCCG CGACGTGGTG
ACCGACCTGG TCAACCCGCG CAGCGCCAGC GACACCGCGC TCGGCTTCAT GATGGTCCCG
GCAGCGCTGG TGAGGTTGCT CCTGCCGATT GCCTTCATCA TTTCGATGTA CCTGTTCGTT
CGGGGCCACA ACCAGCCGGG CGGCGGTTTT GTCGCCGGTC TGGTGATGTC GGTGGCGTTC
ATTCTGCAAT ACATGGTCGC CGGCACTCAG TGGGTCGAGG CGCAAATGAG CCTGCGACCG
CTGCGCTGGA TGGGCACCGG CCTGCTGTGC GCAGTCCTCA CCGGTGCTGG CTCCATGCTG
CTGGGCTACC CGTTCATGAC CACCCACACT GCGCATGTCG ATTTGCCGAT ACTCGGCGAT
ATTCACATCG CCAGCGCCCT GTTTTTCGAT GTCGGCGTGT ATGCGGTGGT GGTCGGGTCG
ACGCTGTTGA TCCTCACTGC GCTGGCTCAC CAGTCGGTGC GCAGCCACCG TCCGACACAG
CTGCCCAAGC CTGTCGCCAA CCCGCAAGGA ATCCTCTGA
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| Protein sequence | MSLIVLLLLP FIGSCLAAIL PHNARNAESF LAGLVALIGA IQMALWFPQI ADGGVIREEY
FWLPSLGMNF VLRIDGFAWL FSMLVLGIGA LVSLYARYYM SPDDPVPRFF AFFLAFMGAM
LGLVMSGNLI QIVFFWELTS LFSFLLIGYW HHRADARRGA YMALMVTGAG GLALLAGMMI
LGHVAGSYDL DRVLASGDAI RAHALYPVLL TLILIGALTK SAQFPFHFWL PHAMAAPTPV
SAYLHSATMV KAGVFLMARM WPALSGTEQW FWIVSGAGAC TLILGAYAAI FQNDLKGLLA
YSTISHLGLI TLLLGLNSPL AAVAAVFHIL NHATFKASLF MAAGIIDHES GTRDIRRLSG
LVKLLPYTAT LAMVASASMA GVPLLNGFLS KEMFFAETVF ISATAWVEIA LPVIATIAGI
FSVAYSLRFT VDVFFGPAAK DLPHLPHEPP RWMRAPVELL VLTCLVVGIF PAQSVAPLLA
AAARPVVGGT LPQYSLAIWH GWNLPMVISL VAMAGGIILY LLLRKPLKHE RITTPPLVGR
LNGKRFFERS LVVVMHWARR FERKVSTRRL QPQLFLLVLA AVLGGFIPMY FSGLTWGDRP
KIPGSGVFVT LWLIAIACAI GAAWQGKYHR LAALVMVSVC GLMTCITFVW FSAPDLALTQ
LVVEVVTTVL ILLGLRWLPR RNEDVAPLSA RLRARTRRIR DFGLAVLVGL GMAILSYAML
TRQTPNAISS FYLSRALPQG GGTNVVNVML VDFRGFDTFG EITVLAAVAL TVFALLRRFR
PPKESILLPT QQRLLARDVV TDLVNPRSAS DTALGFMMVP AALVRLLLPI AFIISMYLFV
RGHNQPGGGF VAGLVMSVAF ILQYMVAGTQ WVEAQMSLRP LRWMGTGLLC AVLTGAGSML
LGYPFMTTHT AHVDLPILGD IHIASALFFD VGVYAVVVGS TLLILTALAH QSVRSHRPTQ
LPKPVANPQG IL
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