Gene PSPTO_3469 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_3469 
Symbol 
ID1185134 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand- 
Start bp3916142 
End bp3916711 
Gene Length570 bp 
Protein Length189 aa 
Translation table11 
GC content62% 
IMG OID637394822 
ProductDNA-binding protein 
Protein accessionNP_793249 
Protein GI28870630 
COG category[K] Transcription 
COG ID[COG1476] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.162788 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCACAAAG AAAACTCGCC ACGCGCGCCG GTTCTGCAAC ATGTCAGCCA TAACGTGCGG 
CGTCTGCGCA ACGCCGCTGA CCTCAGTCAG ACCGCGCTGG CGGAAAAATC CGGCGTCAGT 
CGCCGCATGC TGGTCGCCAT CGAGGCCGGC GAGAAAAACG TCAGCCTGGC AACGCTGGAT 
CGGGTGGCCG AGGCGCTTGA GGTTGCCTTC AGCGACCTGA TTCAGGCGCC GGAAAATCGC 
GATCATAGCC GTATCAACGA ACTGGCCTGG GCAGGTACGA TCCCTGGCAG CAAAGCCGTG 
CTGCTGGCCA GAGCGATCGC ACGGCGAGAG GTTGAATTGT GGGAGTTCTG CCTGGCTCCC 
GGCGATGCCT ACGTGTCAGA AGCCGACCCG GAGGGTTGGA GTGAGCAGGT CTACGTCGTG 
GAAGGTCGGC TGACCCTGCG TTTTGCCGAG CCTGCCGCCG CGCAGCAGGT GGGGCCGGGC 
GAATTCTTCA TGTTCCCCAG CAATCAGCCG CACCGCTACT GCAATGAGGC TGACACCACC 
TTACGCTTCG TGCGCAACGT GGTGCTTTGA
 
Protein sequence
MHKENSPRAP VLQHVSHNVR RLRNAADLSQ TALAEKSGVS RRMLVAIEAG EKNVSLATLD 
RVAEALEVAF SDLIQAPENR DHSRINELAW AGTIPGSKAV LLARAIARRE VELWEFCLAP 
GDAYVSEADP EGWSEQVYVV EGRLTLRFAE PAAAQQVGPG EFFMFPSNQP HRYCNEADTT 
LRFVRNVVL