| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_3467 |
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| Symbol | |
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| ID | 1185132 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 3913277 |
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| End bp | 3914383 |
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| Gene Length | 1107 bp |
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| Protein Length | 368 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637394820 |
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| Product | sigma-54 dependent transcriptional regulator, putative |
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| Protein accession | NP_793247 |
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| Protein GI | 28870628 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.154738 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCCGGGC AACTGCTGAC CTTACCGCAC TCGCCTGCGC TGGCGACCTC GATCAGGGCG
ACTGCGCAGG TATTCGAGGA CCCCAAGTCC AGAGCCCTGC TCGCTCATGT GCGCCAAGTG
GCACCCAGCG ACGCCAGCGT GCTGATCATC GGCGAGACCG GCACCGGCAA GGAACTGGTT
GCAAGGCACG TTCACGAGTT GAGCGCCCGA CGTGACAAGC CGTTTGTGGC GGTCAACTGC
GGCGCGTTCT CCGAAAACCT GATCGAGGCC GAGCTGTTCG GCCACGACAA AGGCGCGTTT
ACCGGTGCAA TCAGCGCCAA GGCCGGCTGG TTTGAAGAGG CCAACGGCGG CACGCTGTTT
CTCGATGAGA TCGGCGATCT GCCCATGACT CTGCAGGTCA AACTGCTGCG CGTGCTTCAA
GAGCGCGAAG TGGTTCGCCT CGGCTCGCGC AAGAGCATTC CGATTGATGT GCGGGTGCTG
GCGGCCACCA ACGTGCAGCT GGAAAAAGCC ATCAATGCCG GGCATTTCCG CGAGGACCTG
TATTACCGGC TGGACGTGGT CAATCTGGAA CTGAGCCCGT TGCGTGACCG GCCGGGCGAT
ATCCTGCCAC TGGCCCGGCA TTTCATCGAG GTCTACAGCC AGCGCCTGCG CCATGGCCCC
GTGCGGATCA GTGCCGAGGC CGAGCACAAA CTCAGGACCT ACAGTTGGCC GGGCAACATT
CGCGAGCTGG AAAACGTCAT TCACCACACG TTGCTGGTCT GCCGCGACGG GATCATTCAG
CGTGATGACC TGCGCATGTC CAACTTGAGG ATTGAGCGTC AGGACGAGCA AAACCAGGCT
GACGAGTCGG CCGAACAGTT GCTCAACCGC GCGTTTCAGA AGCTGTTTGA AGAACAGGCT
GGTGCGTTGC ACGAGAAGGT TGAAGACACG CTGCTCAGAA CGGCTTATCG CTTCTGCCAC
CATAATCAGG TACACACCGC CAGCCTGCTA GGCCTGACCC GCAACGTGAC CCGCACCCGC
CTGATCAAGA TTGGCGAGCT GGCGGTCAAC AAACGCAGAC CGGGTGAGAA TGTGCAGGGC
GACAGGATGT TGCACTTGTC GGTGTAG
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| Protein sequence | MSGQLLTLPH SPALATSIRA TAQVFEDPKS RALLAHVRQV APSDASVLII GETGTGKELV
ARHVHELSAR RDKPFVAVNC GAFSENLIEA ELFGHDKGAF TGAISAKAGW FEEANGGTLF
LDEIGDLPMT LQVKLLRVLQ EREVVRLGSR KSIPIDVRVL AATNVQLEKA INAGHFREDL
YYRLDVVNLE LSPLRDRPGD ILPLARHFIE VYSQRLRHGP VRISAEAEHK LRTYSWPGNI
RELENVIHHT LLVCRDGIIQ RDDLRMSNLR IERQDEQNQA DESAEQLLNR AFQKLFEEQA
GALHEKVEDT LLRTAYRFCH HNQVHTASLL GLTRNVTRTR LIKIGELAVN KRRPGENVQG
DRMLHLSV
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