Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_3459 |
Symbol | |
ID | 1185124 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | - |
Start bp | 3901204 |
End bp | 3901938 |
Gene Length | 735 bp |
Protein Length | 244 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637394812 |
Product | CTP synthase domain protein |
Protein accession | NP_793239 |
Protein GI | 28870620 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0504] CTP synthase (UTP-ammonia lyase) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGGCGTAG CAGACAAAGC GGTCAGAACA TTGCAGATCG GGCTGGTGGG GGATTTCATC GCCCAAGTGC CTGCGCATCA GGCGATCCCG TTGGCGTTGC AGATGGCCGC CGACGCACTA CAGGCTCAGG TCGCCATCAC ATGGTTGCCG ACGCCGCAGA TCGGTGACGG CGTGCGTCTC GGCCAGTTTG ACGGGGTGTG GTGCGTACCC GCCAGCCCGT ACCGCGACAT GCAGGGCGCG CTGACGGCGA TCCGTTTTGC CCGCGAGCGG CTGGTGCCGT TTCTGGGGAC GTGCGGCGGT TTTCAGCATG CGTTGGTTGA GTACGCAAGA AACTGCCTGG GCTGGGCGGA CGCCGAGCAT GGTGAAACGG CGCCGGAGGC GGCAAACGTG ATCATTGCGC CGCTCAGTTG CTCGTTGGTC GATGCCCTGG CACCGATTCA TCTGCAACCC GACACACTGA TCGCTCAGGC CTACGGCACG CTGGATATCG AAGAGCGCTA CCACTGCCGC TATGGCCTGC GCAGCGAGCT GGAATCAGCG CTGTTCGGCA CGGCGTTGAA GGTCAGCGGA CGAGGCCCGG AACGTGATGT ACGCTGCATG GAGTTGCAGG GGCATCCGTT CTTCGTCGCC ACCCTGTTCC AGCCGGAACG TGCTGCGCTG CTGGGCAGAA TTCCACCGGT GGTCGATGCT TTTCTGCGCG CCTGCATCGC CTCTGCAGCG GGTGACGAAT CGTGA
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Protein sequence | MGVADKAVRT LQIGLVGDFI AQVPAHQAIP LALQMAADAL QAQVAITWLP TPQIGDGVRL GQFDGVWCVP ASPYRDMQGA LTAIRFARER LVPFLGTCGG FQHALVEYAR NCLGWADAEH GETAPEAANV IIAPLSCSLV DALAPIHLQP DTLIAQAYGT LDIEERYHCR YGLRSELESA LFGTALKVSG RGPERDVRCM ELQGHPFFVA TLFQPERAAL LGRIPPVVDA FLRACIASAA GDES
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