Gene PSPTO_3459 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_3459 
Symbol 
ID1185124 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand
Start bp3901204 
End bp3901938 
Gene Length735 bp 
Protein Length244 aa 
Translation table11 
GC content64% 
IMG OID637394812 
ProductCTP synthase domain protein 
Protein accessionNP_793239 
Protein GI28870620 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0504] CTP synthase (UTP-ammonia lyase) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGCGTAG CAGACAAAGC GGTCAGAACA TTGCAGATCG GGCTGGTGGG GGATTTCATC 
GCCCAAGTGC CTGCGCATCA GGCGATCCCG TTGGCGTTGC AGATGGCCGC CGACGCACTA
CAGGCTCAGG TCGCCATCAC ATGGTTGCCG ACGCCGCAGA TCGGTGACGG CGTGCGTCTC
GGCCAGTTTG ACGGGGTGTG GTGCGTACCC GCCAGCCCGT ACCGCGACAT GCAGGGCGCG
CTGACGGCGA TCCGTTTTGC CCGCGAGCGG CTGGTGCCGT TTCTGGGGAC GTGCGGCGGT
TTTCAGCATG CGTTGGTTGA GTACGCAAGA AACTGCCTGG GCTGGGCGGA CGCCGAGCAT
GGTGAAACGG CGCCGGAGGC GGCAAACGTG ATCATTGCGC CGCTCAGTTG CTCGTTGGTC
GATGCCCTGG CACCGATTCA TCTGCAACCC GACACACTGA TCGCTCAGGC CTACGGCACG
CTGGATATCG AAGAGCGCTA CCACTGCCGC TATGGCCTGC GCAGCGAGCT GGAATCAGCG
CTGTTCGGCA CGGCGTTGAA GGTCAGCGGA CGAGGCCCGG AACGTGATGT ACGCTGCATG
GAGTTGCAGG GGCATCCGTT CTTCGTCGCC ACCCTGTTCC AGCCGGAACG TGCTGCGCTG
CTGGGCAGAA TTCCACCGGT GGTCGATGCT TTTCTGCGCG CCTGCATCGC CTCTGCAGCG
GGTGACGAAT CGTGA
 
Protein sequence
MGVADKAVRT LQIGLVGDFI AQVPAHQAIP LALQMAADAL QAQVAITWLP TPQIGDGVRL 
GQFDGVWCVP ASPYRDMQGA LTAIRFARER LVPFLGTCGG FQHALVEYAR NCLGWADAEH
GETAPEAANV IIAPLSCSLV DALAPIHLQP DTLIAQAYGT LDIEERYHCR YGLRSELESA
LFGTALKVSG RGPERDVRCM ELQGHPFFVA TLFQPERAAL LGRIPPVVDA FLRACIASAA
GDES