| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_3458 |
|---|
| Symbol | |
|---|
| ID | 1185123 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_004578 |
|---|
| Strand | - |
|---|
| Start bp | 3900878 |
|---|
| End bp | 3901207 |
|---|
| Gene Length | 330 bp |
|---|
| Protein Length | 109 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 637394811 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | NP_793238 |
|---|
| Protein GI | 28870619 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2329] Uncharacterized enzyme involved in biosynthesis of extracellular polysaccharides |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGATTGCGG CACTTTTCCC CACGCCTTAC TTCGCGGTGG TGTTCACCTC GTTGCGTATG
CCTGACGAGG GGCAGGCGTA CGCAACGGCC GCACAGCGGA TGGTCGAACT GGCCCGCCAG
CAACCGGGCT TCCTGGGTGT GGAGTCGGCG CGGGGCGACG ATGGACTGGG TGTGACCGTT
TCCTACTGGA CCGACGAGGC AGCGATCCTG GCCTGGAAGC AGCAGGCCGA GCACGCCGAG
GTCCGCGAGC AGGGCCGCGC GCGCTGGTAT CAGGCCTTTG TCACGCGGGT CTGCAAGGTG
GAGCGCGATT ATTCGTTCAA CGCTCTTTAA
|
|---|
| Protein sequence | MIAALFPTPY FAVVFTSLRM PDEGQAYATA AQRMVELARQ QPGFLGVESA RGDDGLGVTV
SYWTDEAAIL AWKQQAEHAE VREQGRARWY QAFVTRVCKV ERDYSFNAL
|
|---|
| |