| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_3457 |
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| Symbol | |
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| ID | 1185122 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 3899457 |
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| End bp | 3900875 |
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| Gene Length | 1419 bp |
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| Protein Length | 472 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637394810 |
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| Product | short-chain fatty acid transporter |
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| Protein accession | NP_793237 |
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| Protein GI | 28870618 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG2031] Short chain fatty acids transporter |
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| TIGRFAM ID | [TIGR00366] conserved hypothetical integral membrane protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCCGCCA ACATCGAAGA AAGCCGCTCC GCCCGATTTG CCTTGCGGTG TGCCGCCTGG
GCTGAGCGCT GGTTTCCGGA TTCGTGGGTA TTCGCCGCAC TAGCGGTGGT CATCGTCACG
CTGGCGACGC TCGCCATCGG TGCGCGTCCG ACCGACGCCG CCAAGGCCTT CGGAGACGGT
TTCTGGAGCC TGATTCCGTT CACCATGCAG ATGGCCTTCG TGGTCATCGG TGGTTACGTG
GTCGCCAGCT CACCGCCCGC AGTACGCCTG ATCGACCGTC TGGCACGGGT GCCGCGCAAC
GGCCGCTCGG CGGTGGCCTG GGTGGCGCTG ATTTCCATGC TGGCCTCGCT GCTCAACTGG
GGGCTGTCAC TGGTGTTCGG CGGTTTGCTG GTGCGTGCGC TCGCCCGCCG CACCGACCTG
CGTATGGACT ACCGCGCAGC CGGTGCCGCC GCCTATCTGG GGCTTGGCGC GGTATGGGCG
CTGGGGCTGT CATCGTCCGC TGCACAGTTG CAGGCCAACC CGGCCAGCCT GCCGCCATCG
ATTCTGGCGA TCACCGGTGT AATTCCGTTC ACTGAAACCA TCTTTCTCTG GCAGTCCGGA
GTCATGCTCG CAGCGCTGCT CGTCATCTCG CTGATCGTCG CCTATGCCAC GGCGCCCGGC
CCCAACAGCG CCCGCGACGC CAAGGCCTGC GGCATCGACC CGGCGTTCAA TCTGCCGCCG
CTGCCCGCCA GAACCCGGCC AGGCGAATGG CTGGAATACA GCCCGCTGCT GATTATCCTG
ATGGTTGTGC TGGGGGTTGG CTGGCTGTTC AACGAGTTTT CCAACAAGCC TGCAATCACT
GCGATATCGG GGCTCAATAC CTACAACTTT CTGTTCATCA TGCTCGGTGC GCTATTGCAC
TGGCGGCCGC GCAGTTTTCT CGATGCCGTG GCGCGGGCCG TGCCGACCAC CACCGGCGTG
CTGATTCAGT TTCCGCTGTA CGGCTCGATC GCCGCCTTGC TGACAACGGT CAAGGGCGCT
GATGCCCAGA CCCTGGCGCA TTACATTTCG ACGTTCTTCA CCAGCATTGC TTCCCACGAC
ACCTACGCGA TTCTGATGGG CGTCTATTCG GCGATTCTGG GGTTCTTCAT TCCCTCGGGT
GGCGGCAAGT GGATCATCGA AGCCCCTTAC GTGATGCAGG TGGCCAATGA TCTGCAGTAT
CACCTCGGCT GGGCAGTGCA GATCTACAAC GCAGCCGAAG CCTTGCCCAA CCTGATCAAC
CCGTTCTACA TGCTGCCGCT ACTGGGCGTG CTGGGCCTGA AGGCGCGGGA CCTGATCGGC
TTTTCGTTCG TGCAGTTGCT TGTCCATGCG CCGCTGGTGC TGTTTCTGCT TTGGGCGCTG
GGCACCACCC TGACGTATAC GCCGCCGATC ATGCCCTGA
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| Protein sequence | MAANIEESRS ARFALRCAAW AERWFPDSWV FAALAVVIVT LATLAIGARP TDAAKAFGDG
FWSLIPFTMQ MAFVVIGGYV VASSPPAVRL IDRLARVPRN GRSAVAWVAL ISMLASLLNW
GLSLVFGGLL VRALARRTDL RMDYRAAGAA AYLGLGAVWA LGLSSSAAQL QANPASLPPS
ILAITGVIPF TETIFLWQSG VMLAALLVIS LIVAYATAPG PNSARDAKAC GIDPAFNLPP
LPARTRPGEW LEYSPLLIIL MVVLGVGWLF NEFSNKPAIT AISGLNTYNF LFIMLGALLH
WRPRSFLDAV ARAVPTTTGV LIQFPLYGSI AALLTTVKGA DAQTLAHYIS TFFTSIASHD
TYAILMGVYS AILGFFIPSG GGKWIIEAPY VMQVANDLQY HLGWAVQIYN AAEALPNLIN
PFYMLPLLGV LGLKARDLIG FSFVQLLVHA PLVLFLLWAL GTTLTYTPPI MP
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