| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_3456 |
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| Symbol | |
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| ID | 1185121 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 3898357 |
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| End bp | 3899013 |
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| Gene Length | 657 bp |
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| Protein Length | 218 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 637394809 |
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| Product | 3-oxoacid CoA-transferase, subunit B family |
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| Protein accession | NP_793236 |
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| Protein GI | 28870617 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG2057] Acyl CoA:acetate/3-ketoacid CoA transferase, beta subunit |
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| TIGRFAM ID | [TIGR02428] 3-oxoacid CoA-transferase, B subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGCACTTT CCCGCGAACA AATGGCTCAA CGCGTCGCCC GTGAACTCAA GGACGGTTAT
TACGTGAACC TCGGCATCGG CATCCCGACG CTGGTGGCCA ACTATGTGCC GGACGACATC
GACGTCATGC TGCAATCGGA AAACGGCCTC TTGGGCATGG GCGCGTTTCC CACCGAACAA
ACCATTGATG CGGACATGAT CAACGCGGGC AAGCAGACGG TGACTGCGCG CCTCGGTGCG
TCGATTTTCT CGTCTGCCGA GTCGTTTGCC ATGATCCGCG GTGGCCATGT GGACCTGACG
GTGCTGGGTG CTTTCGAGGT GGACGTCGAG GGCAATATTG CCTCCTGGAT GATCCCCGGC
AAGTTGATCA AGGGCATGGG CGGCGCAATG GACCTGGTGG CCGGTGCCGA CAATATCATC
GTGACCATGA CCCATGCGTC CAAGGACGGC GAATCCAAAC TGCTGCCCCG CTGCAGCCTG
CCACTGACTG GCGCGGGCTG CATCCGCAAG GTGTTGACTG ATCTTGCGTA TCTGCAAATC
GAAAACGGTG CCTTCATCCT CCGCGAACGC GCACCGGGAG TCAGCGTGGA AGAAATCGTG
GCCAAAACCG CCGGCAAACT GATCGTGCCG GATGACGTGA TCGAGATGAT TTTCTGA
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| Protein sequence | MALSREQMAQ RVARELKDGY YVNLGIGIPT LVANYVPDDI DVMLQSENGL LGMGAFPTEQ
TIDADMINAG KQTVTARLGA SIFSSAESFA MIRGGHVDLT VLGAFEVDVE GNIASWMIPG
KLIKGMGGAM DLVAGADNII VTMTHASKDG ESKLLPRCSL PLTGAGCIRK VLTDLAYLQI
ENGAFILRER APGVSVEEIV AKTAGKLIVP DDVIEMIF
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