| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_3454 |
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| Symbol | |
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| ID | 1185119 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | - |
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| Start bp | 3896590 |
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| End bp | 3897480 |
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| Gene Length | 891 bp |
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| Protein Length | 296 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637394807 |
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| Product | transcriptional regulator, LysR family |
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| Protein accession | NP_793234 |
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| Protein GI | 28870615 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACATCA AACAACTTCG CGCCTTTCTG GCTGTGGCGC AGCATTTGAG CTTTGCCCAG
GCCGGGGAGC GGCTGAACCT GTCGCAGCCT GCGCTGAGCC TGACCATCAA GGGCCTGGAG
GAGGATCTCG GCGGGCAACT GTTGACGCGC ACCACGCGCA ACGTCGGCCT GACGCCAGAA
GGCGAAACCC TGCTGCCGTT GGCGCGCCAG CTATTGGCCG ACTGGGACAA CACCGAAGAG
CTGCTGCGCC AGCGCTTCAC CCTGCAAATG GGCCGGGTTT CGATCGCCGC CATGCCATCG
TTCGCCGGCA ACCTGCTGCC TGCCGCACTG AAGGTTTTTC GCGGGCGTTA CCCGAGGGTC
AATGTCGCGG TGCATGACGT GATCAACGAG CAAGTACTGG AGATGGTGCG TCACCGTCGC
GTTGAGCTGG GGATCGGTTT CGAGCCGGAG TCCAGCAGCG CCTTGCTGTT TACACCGTTC
TATACGGACC GCTTCGTGGC GGTGGTCGCC AGAGATTCGC CACTGGCCGA ACTTGGCGAG
GTGTCCTGGG CGGCGCTGTT GCGCGAGGAC TTTATTGCGT TACAACGGCC GTCAGCCGTG
CGCTTGCTGC TGGAGCAGGC CGTCGAGCCC CTGCATGGCA AGCTGGCGGT GGCGTTTGAA
AGCCATCAGT TGTCGACCAT CGGGCGCATG GTCGCTAATG GCCTGGGCGT CAGCGCGGTG
CCGTCGCTGT GCATCGGGCA GATGCAGGAA CTCGGGGCCT GTTGCATCGC ACTGGTAGAA
CCGCACATCG AGCGTCGTAT CGGGCTGATG ATGCTCGCCG ATCACACATT GTCCGCCGCT
GCGCAGACTT TGCGCGACGT ATTGATCGAA AACGCTCGGG AAAGTCGATA G
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| Protein sequence | MNIKQLRAFL AVAQHLSFAQ AGERLNLSQP ALSLTIKGLE EDLGGQLLTR TTRNVGLTPE
GETLLPLARQ LLADWDNTEE LLRQRFTLQM GRVSIAAMPS FAGNLLPAAL KVFRGRYPRV
NVAVHDVINE QVLEMVRHRR VELGIGFEPE SSSALLFTPF YTDRFVAVVA RDSPLAELGE
VSWAALLRED FIALQRPSAV RLLLEQAVEP LHGKLAVAFE SHQLSTIGRM VANGLGVSAV
PSLCIGQMQE LGACCIALVE PHIERRIGLM MLADHTLSAA AQTLRDVLIE NARESR
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