| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_3450 |
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| Symbol | |
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| ID | 1185115 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 3893560 |
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| End bp | 3894654 |
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| Gene Length | 1095 bp |
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| Protein Length | 364 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637394803 |
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| Product | capsular polysaccharide biosynthesis protein |
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| Protein accession | NP_793230 |
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| Protein GI | 28870611 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1596] Periplasmic protein involved in polysaccharide export |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGCTGA CGTTAGCGGC CTTGTTGCTC ACCGCTCTGA CCCTGCAAGG CTGTGCGTTT
GCACCGGGCC AGCACATGAC ACCGGACGAC GTTACCAGCA GCGACTCCGA TGAACCCAAA
GCGCAATTGG TCGAGGTGAC CCCCAAAAGC CTCCAGCAAC AGCAGCAACG CGCTACCGCA
GAAGCCAGGG CACTGCCACA GGAATTGCTC GACTACAAAA CCCCGGAATA CGTGATCGGC
GCAGGCGACA CCTTGCTGGT CACCGTCTTC GAGCACCCGG AACTGACCGC GCCGGGCTCT
CAGGACCAAC TGGATGCCAA TACCCGGGAA GTGTTGAACG ACGGCACGCT GTATTTTCCG
TATGTCGGCC GAATTCGCGC CGGTGGCAGG ACAGTCGGCG AGGTTCGAGA GCAATTGCGC
ATGGGCCTGT CACCGCAATA CACCGAGGTC AAAGTCGACG TCAAAGTATT GCGCTACAAC
AGCCAGCGGA TACTGCTGTC CGGCTCGTTC AAGGTGCCCG GCCCGCAACC GGTCACCAAT
ATTCCGCTGA GCCTGGTGCA GGCGGTGAGC GTCGCAGGCG TTGACCTGAC CGATGCAAAC
CTGGCAGGGC TGACCCTGCG CCGCGACGGC CGGGATTACC TGATCGACAT CGACGCGCTG
AACCGCAAGG ACTCGAAACT GAGCAGGATT TTCCTCAAGG ATGGCGATTA CCTGCACCTC
AACAGCAACT CCAGAAACAA GATCTACGTG CTGGGCGAAG TGCGCAATCC GCAGGTCATT
TCTTTCGGCA CCACCCGCCT GACGCTGCTC GAAGCCCTCG GAAACTCTGG CGGGCTCAGC
CCCGACAGCG CAGACGGCAA TGCGGTGTAC GTGATACGCG GCGCGGAAAA CTTCGCCGCT
GCGACATCCA CATCGACCGT TTACCACCTC AATGCCAAAA AACCCACGGC CTACCTGTTG
GCGGGGCAGT TTGAGCTCAA GGCACAGGAC GTCGTGTTCG TCGGCCCGGC CGATATCACC
CGCTGGAGCC GATTCATCAG CCAGCTACTC GGCTCGGCCA GCGTGGTGCA GACCGGCGCG
GCGTTCCGCA ACTGA
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| Protein sequence | MKLTLAALLL TALTLQGCAF APGQHMTPDD VTSSDSDEPK AQLVEVTPKS LQQQQQRATA
EARALPQELL DYKTPEYVIG AGDTLLVTVF EHPELTAPGS QDQLDANTRE VLNDGTLYFP
YVGRIRAGGR TVGEVREQLR MGLSPQYTEV KVDVKVLRYN SQRILLSGSF KVPGPQPVTN
IPLSLVQAVS VAGVDLTDAN LAGLTLRRDG RDYLIDIDAL NRKDSKLSRI FLKDGDYLHL
NSNSRNKIYV LGEVRNPQVI SFGTTRLTLL EALGNSGGLS PDSADGNAVY VIRGAENFAA
ATSTSTVYHL NAKKPTAYLL AGQFELKAQD VVFVGPADIT RWSRFISQLL GSASVVQTGA
AFRN
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