Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_3443 |
Symbol | |
ID | 1185108 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | + |
Start bp | 3884397 |
End bp | 3886658 |
Gene Length | 2262 bp |
Protein Length | 753 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 637394796 |
Product | tyrosine-protein kinase |
Protein accession | NP_793223 |
Protein GI | 28870604 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3206] Uncharacterized protein involved in exopolysaccharide biosynthesis |
TIGRFAM ID | [TIGR01005] exopolysaccharide transport protein family [TIGR01007] capsular exopolysaccharide family |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCGTCA TGAGCCGTCC TACCCTGGAT TACTACCAGG ACGCACGAAT CGACCTGGCC ACTGTACTGC GGATCCTGTT CGATCAAAAA GCCTTGATCC TGTGGACCGT CGGCCTGTTT TTTCTGATTG GCCTGGCCTA CGCCGTTCTC AGTACGCCGG TGTATCAGGC CAACGCCATG ATCCAGATAG AGCCGAGAAA AATCGGCATC GAAGGCACCC CGGAGGTCAG CGGCAAACCG TTGTCAGTGT CCCAGGCAAC CACCGAAATC GAGCTGATCA AGTCACGCGC GCTGCTGGGC AAAGTGGTCG ACGACCTGCA GCTCAATGTG CTGCAAAAGC CCGATCTGTT CCCGGTGATC GGCCCTTATC TGTATCGCAC GTTTGCACCG CCGCAGGACG GTGCACTGGC CGAGCCGTTG TGGGGCCTGT CGCACTACGC GTGGGGCGGC GAAAAGATCG AGGTCTTTCA ACTGGAAGTG CCGGAACACC TGCTGGGTGA AAAGCTCACC CTGACCGCCG GCAAGCCAGG CCAGTTCGCG CTTTACGACA GCGACCACAA TCGATTGCTG GGCGGCGCCG TCAATCGCGT TATCGAGGGC AACGGGGTAA AGATTCAGAT AGCTGCACTG CTGGCACGCC CCGGCACGGA TTTCACGGTG TCCAGACAAC GCACGCTCGG CACCGCGCTG GTTTATCAGA ATCGCTTGAA GATTGCTGAG GCAGGCAGAG ACTCCGGCAT CATCTACCTG TCCATCGAAG ACCAGGATGC GCAACGGGCC AACCGGATTC TGGATCAGAT CAGCCGTTTG TACGTACGTC AGAACGTCGA GCGCAGCTCT GCGGAAGCCG CCCAGCGCTT GCAATTTCTG CGCTCGCAGT TACCGGCGGT GCGCAAGCAG CTGGAAGAAT CGGAAGCGGC GCTGAACGCC TTCCAGACCA GCGCCCGATC GGTGGACCTG AGCATCGAAA CCAAAGGTTT GCTGGACCAG GTGGTGCATC TGGACTCGAT GCTGTCCGAG CTGAAACTCA AGCGCGTCGA GCTTGAGCGG TTGTATACCC GCGAGCACCC GACCTATCGC AGCCTGATGA GCCAGATAAA CCAGCTGGAA CAACAGAAAC AGGGCCTGCT GAAAAAGATC GAAACACTGC CCATGACCCA GCAGGAACTG CTGCGCCTGA CCCGCGACAT GCAGGTCACC AGCCAGACTT ACACGCTGAT GCTCAACAAG AGCCAGGAGC AGGACATTCT GCGGGCGGGC AACATCGGTA ACGTGCGGGT CATCGACAAC GCCGACAGCA ACATCGAAAA GCCCGTCAAA CCGATGAAGA CCCTGATTGT GCTGATTGCC ACGTTGCTGG GTGCACTGGC CGCGACGGTC ATCATTTTCG TGCGCCAGGC GTTCTATCGC GGGGTTGAAA GCGCCGAGGT CATCGAAAAT CTCGGCATGC CGGTTTACGC ATCGCTGCCC TACTCGCGTC AGCAGGAACG TCTGGAGAAG CGCGGCAAAA ACACGCAGGG CAAGAACATG CCCGGCGAGG AGCGCCATGG CAAAGACAGC CAGAGCGTGC AAGTGTCGAG ACTGCTGAGC ATTGCCGCCC CCAGCGAGCT GGCTATCGAA TCGTTGCGCA GCCTGCGCAC CAGCCTGCAT TTCGCCATGC TTGAGGCGCG TAACAATGTG CTGATGATCT CGAGCCCCAC GCCAGGCGCC GGCAAATCGT TCGTGTCGAG CAATCTGGCC GCGATCATTG CGCAGACCGG CAAGCGTGTG TTGCTCATCG ATGCTGACAT GCGCAAGGGC TACCTGCATC GCCTTTTCGG CCTGCAACCC AAGCACGGTC TGTCCGACAC GCTGGCCGCG CGCTTGCGCT GTACCGAGGT CATCAATCCG ACACGGATTC GCCACCTGGA CTTCATCTCC TGCGGTTTCG CGGCACCCAA CCCCTCGGAG CTGCTGATGC ATGACAACTT CCACAAGATG CTGGCCGAAC TGTCGCCGCT CTATGACCTG ATTCTGGTCG ACACGCCACC CATCCTTGCC GTGACCGACG CCACGCTGGT GGGACGTCAG GCAGGCACTT GCCTGCTGGT CGCGCGTTTC GGCATGACCA CCGTCAAGGA AATCGAAGCC TGCAAGCGCC GCCTGGGCCA GAACGGCATT CTGATCAAGG GCGCCATTTT CAACGCGGTG GTACGCAAGG CCACGACGTC CGACTACGAC TGCGCCGCCT ACGGCTACAA CTACCACCCT GCGCCCCGGT AG
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Protein sequence | MTVMSRPTLD YYQDARIDLA TVLRILFDQK ALILWTVGLF FLIGLAYAVL STPVYQANAM IQIEPRKIGI EGTPEVSGKP LSVSQATTEI ELIKSRALLG KVVDDLQLNV LQKPDLFPVI GPYLYRTFAP PQDGALAEPL WGLSHYAWGG EKIEVFQLEV PEHLLGEKLT LTAGKPGQFA LYDSDHNRLL GGAVNRVIEG NGVKIQIAAL LARPGTDFTV SRQRTLGTAL VYQNRLKIAE AGRDSGIIYL SIEDQDAQRA NRILDQISRL YVRQNVERSS AEAAQRLQFL RSQLPAVRKQ LEESEAALNA FQTSARSVDL SIETKGLLDQ VVHLDSMLSE LKLKRVELER LYTREHPTYR SLMSQINQLE QQKQGLLKKI ETLPMTQQEL LRLTRDMQVT SQTYTLMLNK SQEQDILRAG NIGNVRVIDN ADSNIEKPVK PMKTLIVLIA TLLGALAATV IIFVRQAFYR GVESAEVIEN LGMPVYASLP YSRQQERLEK RGKNTQGKNM PGEERHGKDS QSVQVSRLLS IAAPSELAIE SLRSLRTSLH FAMLEARNNV LMISSPTPGA GKSFVSSNLA AIIAQTGKRV LLIDADMRKG YLHRLFGLQP KHGLSDTLAA RLRCTEVINP TRIRHLDFIS CGFAAPNPSE LLMHDNFHKM LAELSPLYDL ILVDTPPILA VTDATLVGRQ AGTCLLVARF GMTTVKEIEA CKRRLGQNGI LIKGAIFNAV VRKATTSDYD CAAYGYNYHP APR
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