Gene PSPTO_3443 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_3443 
Symbol 
ID1185108 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand
Start bp3884397 
End bp3886658 
Gene Length2262 bp 
Protein Length753 aa 
Translation table11 
GC content60% 
IMG OID637394796 
Producttyrosine-protein kinase 
Protein accessionNP_793223 
Protein GI28870604 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3206] Uncharacterized protein involved in exopolysaccharide biosynthesis 
TIGRFAM ID[TIGR01005] exopolysaccharide transport protein family
[TIGR01007] capsular exopolysaccharide family 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCGTCA TGAGCCGTCC TACCCTGGAT TACTACCAGG ACGCACGAAT CGACCTGGCC 
ACTGTACTGC GGATCCTGTT CGATCAAAAA GCCTTGATCC TGTGGACCGT CGGCCTGTTT
TTTCTGATTG GCCTGGCCTA CGCCGTTCTC AGTACGCCGG TGTATCAGGC CAACGCCATG
ATCCAGATAG AGCCGAGAAA AATCGGCATC GAAGGCACCC CGGAGGTCAG CGGCAAACCG
TTGTCAGTGT CCCAGGCAAC CACCGAAATC GAGCTGATCA AGTCACGCGC GCTGCTGGGC
AAAGTGGTCG ACGACCTGCA GCTCAATGTG CTGCAAAAGC CCGATCTGTT CCCGGTGATC
GGCCCTTATC TGTATCGCAC GTTTGCACCG CCGCAGGACG GTGCACTGGC CGAGCCGTTG
TGGGGCCTGT CGCACTACGC GTGGGGCGGC GAAAAGATCG AGGTCTTTCA ACTGGAAGTG
CCGGAACACC TGCTGGGTGA AAAGCTCACC CTGACCGCCG GCAAGCCAGG CCAGTTCGCG
CTTTACGACA GCGACCACAA TCGATTGCTG GGCGGCGCCG TCAATCGCGT TATCGAGGGC
AACGGGGTAA AGATTCAGAT AGCTGCACTG CTGGCACGCC CCGGCACGGA TTTCACGGTG
TCCAGACAAC GCACGCTCGG CACCGCGCTG GTTTATCAGA ATCGCTTGAA GATTGCTGAG
GCAGGCAGAG ACTCCGGCAT CATCTACCTG TCCATCGAAG ACCAGGATGC GCAACGGGCC
AACCGGATTC TGGATCAGAT CAGCCGTTTG TACGTACGTC AGAACGTCGA GCGCAGCTCT
GCGGAAGCCG CCCAGCGCTT GCAATTTCTG CGCTCGCAGT TACCGGCGGT GCGCAAGCAG
CTGGAAGAAT CGGAAGCGGC GCTGAACGCC TTCCAGACCA GCGCCCGATC GGTGGACCTG
AGCATCGAAA CCAAAGGTTT GCTGGACCAG GTGGTGCATC TGGACTCGAT GCTGTCCGAG
CTGAAACTCA AGCGCGTCGA GCTTGAGCGG TTGTATACCC GCGAGCACCC GACCTATCGC
AGCCTGATGA GCCAGATAAA CCAGCTGGAA CAACAGAAAC AGGGCCTGCT GAAAAAGATC
GAAACACTGC CCATGACCCA GCAGGAACTG CTGCGCCTGA CCCGCGACAT GCAGGTCACC
AGCCAGACTT ACACGCTGAT GCTCAACAAG AGCCAGGAGC AGGACATTCT GCGGGCGGGC
AACATCGGTA ACGTGCGGGT CATCGACAAC GCCGACAGCA ACATCGAAAA GCCCGTCAAA
CCGATGAAGA CCCTGATTGT GCTGATTGCC ACGTTGCTGG GTGCACTGGC CGCGACGGTC
ATCATTTTCG TGCGCCAGGC GTTCTATCGC GGGGTTGAAA GCGCCGAGGT CATCGAAAAT
CTCGGCATGC CGGTTTACGC ATCGCTGCCC TACTCGCGTC AGCAGGAACG TCTGGAGAAG
CGCGGCAAAA ACACGCAGGG CAAGAACATG CCCGGCGAGG AGCGCCATGG CAAAGACAGC
CAGAGCGTGC AAGTGTCGAG ACTGCTGAGC ATTGCCGCCC CCAGCGAGCT GGCTATCGAA
TCGTTGCGCA GCCTGCGCAC CAGCCTGCAT TTCGCCATGC TTGAGGCGCG TAACAATGTG
CTGATGATCT CGAGCCCCAC GCCAGGCGCC GGCAAATCGT TCGTGTCGAG CAATCTGGCC
GCGATCATTG CGCAGACCGG CAAGCGTGTG TTGCTCATCG ATGCTGACAT GCGCAAGGGC
TACCTGCATC GCCTTTTCGG CCTGCAACCC AAGCACGGTC TGTCCGACAC GCTGGCCGCG
CGCTTGCGCT GTACCGAGGT CATCAATCCG ACACGGATTC GCCACCTGGA CTTCATCTCC
TGCGGTTTCG CGGCACCCAA CCCCTCGGAG CTGCTGATGC ATGACAACTT CCACAAGATG
CTGGCCGAAC TGTCGCCGCT CTATGACCTG ATTCTGGTCG ACACGCCACC CATCCTTGCC
GTGACCGACG CCACGCTGGT GGGACGTCAG GCAGGCACTT GCCTGCTGGT CGCGCGTTTC
GGCATGACCA CCGTCAAGGA AATCGAAGCC TGCAAGCGCC GCCTGGGCCA GAACGGCATT
CTGATCAAGG GCGCCATTTT CAACGCGGTG GTACGCAAGG CCACGACGTC CGACTACGAC
TGCGCCGCCT ACGGCTACAA CTACCACCCT GCGCCCCGGT AG
 
Protein sequence
MTVMSRPTLD YYQDARIDLA TVLRILFDQK ALILWTVGLF FLIGLAYAVL STPVYQANAM 
IQIEPRKIGI EGTPEVSGKP LSVSQATTEI ELIKSRALLG KVVDDLQLNV LQKPDLFPVI
GPYLYRTFAP PQDGALAEPL WGLSHYAWGG EKIEVFQLEV PEHLLGEKLT LTAGKPGQFA
LYDSDHNRLL GGAVNRVIEG NGVKIQIAAL LARPGTDFTV SRQRTLGTAL VYQNRLKIAE
AGRDSGIIYL SIEDQDAQRA NRILDQISRL YVRQNVERSS AEAAQRLQFL RSQLPAVRKQ
LEESEAALNA FQTSARSVDL SIETKGLLDQ VVHLDSMLSE LKLKRVELER LYTREHPTYR
SLMSQINQLE QQKQGLLKKI ETLPMTQQEL LRLTRDMQVT SQTYTLMLNK SQEQDILRAG
NIGNVRVIDN ADSNIEKPVK PMKTLIVLIA TLLGALAATV IIFVRQAFYR GVESAEVIEN
LGMPVYASLP YSRQQERLEK RGKNTQGKNM PGEERHGKDS QSVQVSRLLS IAAPSELAIE
SLRSLRTSLH FAMLEARNNV LMISSPTPGA GKSFVSSNLA AIIAQTGKRV LLIDADMRKG
YLHRLFGLQP KHGLSDTLAA RLRCTEVINP TRIRHLDFIS CGFAAPNPSE LLMHDNFHKM
LAELSPLYDL ILVDTPPILA VTDATLVGRQ AGTCLLVARF GMTTVKEIEA CKRRLGQNGI
LIKGAIFNAV VRKATTSDYD CAAYGYNYHP APR