| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_3440 |
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| Symbol | |
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| ID | 1185105 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 3881486 |
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| End bp | 3883000 |
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| Gene Length | 1515 bp |
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| Protein Length | 504 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637394793 |
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| Product | polysaccharide biosynthesis protein, putative |
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| Protein accession | NP_793220 |
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| Protein GI | 28870601 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2244] Membrane protein involved in the export of O-antigen and teichoic acid |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0552602 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAAAACA GACACTCGGT GATTCGCAAT ACCGTTCTGA ACTACAGCGG GCAGGCCTAC
GTGCTGCTGA TCGGGATTCT GATCATGCCG TTTTATCTGG GCCATCTGGG TGCCGAGGCC
TACGGGCTGA TCGGCTTCTT CACCCTGCTG CAAGCCTGGC TGCAACTGCT GGATGCAGGG
CTGTCTCCCA GCCTGGTTCG CGCAGTGGCC CAGCAACAGA GCCTGCCGGC AGGTGAACAG
AGCCTGGGGC GGCTGTTGCG CTCGTTCGAG CTGATATTTC TGCCGTTGGC AGTGCTCAGT
GGCGTGCTCA TTGTCGCTGC CAGCGCCTGG ATTGCGACCC ACTGGCTCAA TGCCAATACC
CTGCAACCTG AAACACTGAC CCATTGCATC GCGCTGATGG GCGTCATCAT TGCCCTGCGT
CTGTATTCGA CGCTGTACAA AAGTGGCATT CAAGGCCTTG AACAGCATGC CTGGCTCAAT
GCTGCCAATG TATCGATCGC CACGTTGCGC TATTTCGGCG GTTTAGTGCT GGTCAGTCAG
TTTTCCCGGG ACCCGCGGGA CTTCTTTGAA TTTCAGGTGG CGGTCGGGCT GATCGAAACC
CTGCTGTTCG CCGGCAAAGC CCACCGGCAG ATGCCCGCCC CGCACTGGAT GAGCGGGCTG
GACTGGCCCT TGCTCAAACC GATCCTGCCC TTTGCCGCCA GCCTGTCGCT GAGCGCAGTG
CTGTGGATCG TGCTGACCCA ACTGGACAAA GTGCTGCTGT CCCGTCTCTT GCCGCTGGAC
CAGTACGGCT ATTTTTCCCT GGTGGCGTTG ATTGCCGCCG GCATCATGAT GCTGACCAAC
CCGCTGGTTC AGACGCTGCT GCCACGCCTG ACGGTGCTGA TGGCCGAGGG GCATCGCGAC
GAGATGCACG CGTTGTTTTT GGCGGCCAAC CGGCTTGTTT GTACCTGCCT GTTTCCTTTG
GCGGCGCTCA TTGCCCTGCA AGCCGAACCG CTGATCTTCG CTTGGACAGG GGACCAGGCC
GCCGCGAGCT GGAGCGGCCC GGTGCTGGGC TGGTATGCAC TGGGCAGCGC GATCATGGCG
GCCAGCGCCT TTCAGTTCTA CCTGCAATAC ACCTACGGCC GCATGCACCT GCACCTCTGG
TACAGCGTGA TCTCGACGCT GATCAGCGTG CCCGTGATGT GCCTGGCGAT TCATTGGCAG
GGCGTGCACG GCGCGGCGCT GGCGTGGTTT TTCCTGCGTG CAACATCGTT CGCCATCTGG
CCGGCCATCG TGCATCAGCG CCTGGTACCC GGCATCCATC GGGCATGGCT GAGCGACATG
CTGCGCATCA GCGCAATGAC CGCACTGGGG CTGGCGATCA GCACACCGGT CTTTGACCTG
ATTGCCGGTC AGAGCCGCAG CAGCCTGTTT ATGGCGCTGG CCGCCAGCGG GCTGATCACC
CTGACGCTGG TAGCGGCAAG CCACAAACCG CTGGCATCGA AAATCTATGT TTTGTTCAGC
AGAACGAGTA CCTGA
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| Protein sequence | MQNRHSVIRN TVLNYSGQAY VLLIGILIMP FYLGHLGAEA YGLIGFFTLL QAWLQLLDAG
LSPSLVRAVA QQQSLPAGEQ SLGRLLRSFE LIFLPLAVLS GVLIVAASAW IATHWLNANT
LQPETLTHCI ALMGVIIALR LYSTLYKSGI QGLEQHAWLN AANVSIATLR YFGGLVLVSQ
FSRDPRDFFE FQVAVGLIET LLFAGKAHRQ MPAPHWMSGL DWPLLKPILP FAASLSLSAV
LWIVLTQLDK VLLSRLLPLD QYGYFSLVAL IAAGIMMLTN PLVQTLLPRL TVLMAEGHRD
EMHALFLAAN RLVCTCLFPL AALIALQAEP LIFAWTGDQA AASWSGPVLG WYALGSAIMA
ASAFQFYLQY TYGRMHLHLW YSVISTLISV PVMCLAIHWQ GVHGAALAWF FLRATSFAIW
PAIVHQRLVP GIHRAWLSDM LRISAMTALG LAISTPVFDL IAGQSRSSLF MALAASGLIT
LTLVAASHKP LASKIYVLFS RTST
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