Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_3428 |
Symbol | |
ID | 1185088 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | + |
Start bp | 3864581 |
End bp | 3865039 |
Gene Length | 459 bp |
Protein Length | 152 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 637394779 |
Product | hypothetical protein |
Protein accession | NP_793211 |
Protein GI | 28870592 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.00000500038 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCCGCA CCGGAGCGCG TGACAAAGCG CGCAGACAGC TTACCGAGAC ACTGGCTTTA TTGACTCAGG CAGTCTCACT ACTGAGCAAA TCGCGGGTGG TGCTCAAGCG GTCGCGGTCT ACAGATGCTG CTGAGTGCTT GGCAATGATC GAATCATTTT GCAGTTGTCC GTTGCCCACA CATCCCAACC AGCACCCTGA CAACCTGGCC GTAGACCGGT TTGCTACTGC GATGAAAACG AAGCTTGCCG AGGGTCGCGC CAAAGGCCGG GATAGCTGGG ACATGCCGTG GGTGAAAGAC CAGCAGCTCG CAGAACATCT GGTTAAGCAC TTGCCAAAGG GTAACTCTGG CAATTTTGAA GACATAGCCA ACTTCGCAAT GATGCTGCAT CAACGAGGTG CCGATCCCCA TGAGCTGACT GTGGCCTACG CCGCAATTCG GCAGGGCTCA GATCAATGA
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Protein sequence | MSRTGARDKA RRQLTETLAL LTQAVSLLSK SRVVLKRSRS TDAAECLAMI ESFCSCPLPT HPNQHPDNLA VDRFATAMKT KLAEGRAKGR DSWDMPWVKD QQLAEHLVKH LPKGNSGNFE DIANFAMMLH QRGADPHELT VAYAAIRQGS DQ
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