Gene PSPTO_3428 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_3428 
Symbol 
ID1185088 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand
Start bp3864581 
End bp3865039 
Gene Length459 bp 
Protein Length152 aa 
Translation table11 
GC content56% 
IMG OID637394779 
Producthypothetical protein 
Protein accessionNP_793211 
Protein GI28870592 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000500038 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCCGCA CCGGAGCGCG TGACAAAGCG CGCAGACAGC TTACCGAGAC ACTGGCTTTA 
TTGACTCAGG CAGTCTCACT ACTGAGCAAA TCGCGGGTGG TGCTCAAGCG GTCGCGGTCT
ACAGATGCTG CTGAGTGCTT GGCAATGATC GAATCATTTT GCAGTTGTCC GTTGCCCACA
CATCCCAACC AGCACCCTGA CAACCTGGCC GTAGACCGGT TTGCTACTGC GATGAAAACG
AAGCTTGCCG AGGGTCGCGC CAAAGGCCGG GATAGCTGGG ACATGCCGTG GGTGAAAGAC
CAGCAGCTCG CAGAACATCT GGTTAAGCAC TTGCCAAAGG GTAACTCTGG CAATTTTGAA
GACATAGCCA ACTTCGCAAT GATGCTGCAT CAACGAGGTG CCGATCCCCA TGAGCTGACT
GTGGCCTACG CCGCAATTCG GCAGGGCTCA GATCAATGA
 
Protein sequence
MSRTGARDKA RRQLTETLAL LTQAVSLLSK SRVVLKRSRS TDAAECLAMI ESFCSCPLPT 
HPNQHPDNLA VDRFATAMKT KLAEGRAKGR DSWDMPWVKD QQLAEHLVKH LPKGNSGNFE
DIANFAMMLH QRGADPHELT VAYAAIRQGS DQ