| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_3421 |
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| Symbol | |
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| ID | 1185081 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 3857990 |
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| End bp | 3858721 |
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| Gene Length | 732 bp |
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| Protein Length | 243 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 637394772 |
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| Product | repressor protein c2 |
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| Protein accession | NP_793204 |
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| Protein GI | 28870585 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG1974] SOS-response transcriptional repressors (RecA-mediated autopeptidases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.000122682 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGTTGATA AAAATGAATT GCGCGTTGCA TTTAGCTCAC GCCTGCGAGA AGCATTGAAC
GATGCTGGGG TTCGCACGCG AGGCAGAGGC GTGGACGTCC ATAAACAGCT CAAAGTGATG
GGCGTTTTCA AAACGACTCA AGCCATAAGC AAATGGCTAA ACGCAGAGGC GATCGCTGAG
GCTGACAGCA TGGAGGCGCT CTGCTCTTGG CTAGGAATAC GCCGTGAATG GCTGGAATAT
GGGGTAGGCC CGAAGACTAA TGACATTCAT GTGTACTCCT CGGATCCTAA AAACATCTCC
GGGAGCAACA TCGTTCCGCT CCCCAACACA TCAGGCAAGG TACCGCTTAT TTCTTGGGTA
CAAGCAGGAG CTTGGTGTGA GACGTATTCG AATGTAGAGT CTGAAAGTGC AGAGTCATGG
CTATCATGCC CAGTCCCAAT AAGCAGTAGC GGGTATGCAC TCAAGGTGCG AGGGGACTCA
ATGACCAATC CAGGTCTTGG CAGAAGCTAT CCCGCAGGCT GCATAATTTT CGTCGATCCT
GAAGTAGAAG TTCATACAGG CGATAGAGTT ATAGCGAGAT TGGATAGAAC TAACGAAGCG
ACATTCAAGG TTTTTGTAGA AGATGCAGGA CAGCAATTTT TAAAGCCTAT AAATCCTCAG
TACCCGATAA TAAAGATAAC TGAAGAAACG CATATTTGCG GCAAGGTCAT TGGTTCATTT
ATCCCCGAAT GA
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| Protein sequence | MVDKNELRVA FSSRLREALN DAGVRTRGRG VDVHKQLKVM GVFKTTQAIS KWLNAEAIAE
ADSMEALCSW LGIRREWLEY GVGPKTNDIH VYSSDPKNIS GSNIVPLPNT SGKVPLISWV
QAGAWCETYS NVESESAESW LSCPVPISSS GYALKVRGDS MTNPGLGRSY PAGCIIFVDP
EVEVHTGDRV IARLDRTNEA TFKVFVEDAG QQFLKPINPQ YPIIKITEET HICGKVIGSF
IPE
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