| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_3410 |
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| Symbol | |
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| ID | 1185070 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | - |
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| Start bp | 3848149 |
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| End bp | 3849630 |
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| Gene Length | 1482 bp |
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| Protein Length | 493 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637394761 |
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| Product | portal protein |
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| Protein accession | NP_793193 |
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| Protein GI | 28870574 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG5511] Bacteriophage capsid protein |
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| TIGRFAM ID | [TIGR01539] phage portal protein, lambda family |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.797214 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAGTACTC GTTACCCCAC CCTGACACGT TCCGGCTTCG TCCTGCCCGA GCGCATGAAG
GCCAGTTACG AAGGCGCTGC CGACGGTCGC CGATCGGCCA CATGGGACGC ACCTGATACC
GGCGTCAACA GCCTGATCAT GCCCGCGCTG CGCAACTTGC GCTCCCGCTC CAGAGCCGCA
GTGCGCAATG ACCCTTACGC GGCCAACGCG ATTGATCGCA GGGTCAGCAA CCTGATCGGC
ACCGGCATCA CCCCGCAGCC GAGGATCGCG GACAAGGAAT TGCGCCGTAT CTTTCAGGAG
ACGTGGGAAG ACTGGGTAGA CGAGTCTGAT GCCGATCAGT TGACCGACTT CTACGGCCAG
CAAGCCTTGA TCGCGCGGAC GGTCGAGCAG TCGGGCGAAT GCTTCGTCCG GTTACGGCCC
AGGCGGATGG ATGACGGCTT AGCGGTGCCC TTGCAGTTGC AATGCCTGGC ACCTGAGTTT
GTTCCGCATG ACAAGTTTGA GGTGACCAGC ACCGGCAACA TCATCCGCGC CGGGATCGAA
TTCAACGGAT TCGGCAAGCG GGTGGCCTAC TGGTGTTATC GCTCACATCC CAGTGACATG
ACCTCTATCA ACGCCGGTTA CAACATGCTG GTGCGTATCC CGGCCAGCCA GATGCTGCAC
ATCTTTGAGC CGGTGGAGCC CGGTCAGCTT CGCGGTGTTC CTCGGCTTGC ACCAGTGCTC
AAGAGACTGC GCAGCCTGGA CAACTTCGAC GATGCTGTCC TGTTCCGTCA GGAGGTAGCC
AACCTGTTCG CGGGCTTCAT CCGCAAGCCT TCTGCTGACG GTCCGCCCAT GCTCGACCCG
TTGACGGGCG CGCCGATCAA GATCGGAGGC GACGGCTTCA CGCCGATGGT CGCGCTGGAG
CCAGGCACGA TGCAGGAGCT GCTGCCGGGG GAGGAGGTCG AATTCTCGAC ACCGCCTGAT
GGCGGCAATA ACTATCCCGA CTTCATGCGG CAGCAGCTTA TGGCGGCAGC CGCCGGTGCG
GGGCTGCCCT ATGAGTTGAT GACCGGCGAC ATGCGCGGCG TCAACGACCG CACCATCCGG
GTGGTGCTCA ACGAGTTTCG TCGGCGTCTG GAGCAGCTGC AGTTCAGCGT GTATGTCCAC
CAACTGTGCC GTCCCGTCCG GGCGGCGTGG ATGGACATGG CGGTGTTGTC GGGTGCTTTG
CAACTGGACG ACTACGCAGC ACGCCGCCGT GAATACCTGC GCACGCGCTG GGTACCGCAA
GGCTGGTCCT ACATCCACCC GGTGCAGGAC GTGCAATCAA GGACGATGGA AATCAACGCT
GGCCTGGCCT CGCGCAGTGA GATGTGCCTG CGCACCGGCA CCGATGCCGA GATCGTGGAT
GAAGAAAACG CCGCCGATGC GGCCCGAGCC CGTGGACTGG GCCTCAACTA CAGCACCTTG
TCGGCGTTCG ATGAGGACCC CGACGAGAAG GAGAACCCAT GA
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| Protein sequence | MSTRYPTLTR SGFVLPERMK ASYEGAADGR RSATWDAPDT GVNSLIMPAL RNLRSRSRAA
VRNDPYAANA IDRRVSNLIG TGITPQPRIA DKELRRIFQE TWEDWVDESD ADQLTDFYGQ
QALIARTVEQ SGECFVRLRP RRMDDGLAVP LQLQCLAPEF VPHDKFEVTS TGNIIRAGIE
FNGFGKRVAY WCYRSHPSDM TSINAGYNML VRIPASQMLH IFEPVEPGQL RGVPRLAPVL
KRLRSLDNFD DAVLFRQEVA NLFAGFIRKP SADGPPMLDP LTGAPIKIGG DGFTPMVALE
PGTMQELLPG EEVEFSTPPD GGNNYPDFMR QQLMAAAAGA GLPYELMTGD MRGVNDRTIR
VVLNEFRRRL EQLQFSVYVH QLCRPVRAAW MDMAVLSGAL QLDDYAARRR EYLRTRWVPQ
GWSYIHPVQD VQSRTMEINA GLASRSEMCL RTGTDAEIVD EENAADAARA RGLGLNYSTL
SAFDEDPDEK ENP
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