Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_3401 |
Symbol | |
ID | 1185061 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | - |
Start bp | 3842881 |
End bp | 3843207 |
Gene Length | 327 bp |
Protein Length | 108 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637394752 |
Product | baseplate assembly protein W |
Protein accession | NP_793184 |
Protein GI | 28870565 |
COG category | [R] General function prediction only |
COG ID | [COG3628] Phage baseplate assembly protein W |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATCGGAA TGGATCGCCG TACCGGTCAG CCTGTCTCCG GCCTGGCGCA CCTGCGGCAG TCCATCGAAG ACATTCTTGG CACTCCCGTC GGCAGCCGCC GAATGCGCCC GGAGTACGGC AGCAAGATCC GGCGCTTTGT CGACCTGCCT GTGAACGATG GCTGGAAAAG TGCGGTGCAG GCCGAGGTGG CCAGATCGCT CGGGCGCTGG GAACCTCGCC TGAGGCTTGA GCGTGTCAGG GTGATTGCGG TCCTGAACGG CCAGGTCACC TTGGAAGTGC AGGGGACGTA TCTGGGTGAC AATGCAGTGT TGGAGGTGAC GGCGTGA
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Protein sequence | MIGMDRRTGQ PVSGLAHLRQ SIEDILGTPV GSRRMRPEYG SKIRRFVDLP VNDGWKSAVQ AEVARSLGRW EPRLRLERVR VIAVLNGQVT LEVQGTYLGD NAVLEVTA
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