Gene PSPTO_3401 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_3401 
Symbol 
ID1185061 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand
Start bp3842881 
End bp3843207 
Gene Length327 bp 
Protein Length108 aa 
Translation table11 
GC content63% 
IMG OID637394752 
Productbaseplate assembly protein W 
Protein accessionNP_793184 
Protein GI28870565 
COG category[R] General function prediction only 
COG ID[COG3628] Phage baseplate assembly protein W 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATCGGAA TGGATCGCCG TACCGGTCAG CCTGTCTCCG GCCTGGCGCA CCTGCGGCAG 
TCCATCGAAG ACATTCTTGG CACTCCCGTC GGCAGCCGCC GAATGCGCCC GGAGTACGGC
AGCAAGATCC GGCGCTTTGT CGACCTGCCT GTGAACGATG GCTGGAAAAG TGCGGTGCAG
GCCGAGGTGG CCAGATCGCT CGGGCGCTGG GAACCTCGCC TGAGGCTTGA GCGTGTCAGG
GTGATTGCGG TCCTGAACGG CCAGGTCACC TTGGAAGTGC AGGGGACGTA TCTGGGTGAC
AATGCAGTGT TGGAGGTGAC GGCGTGA
 
Protein sequence
MIGMDRRTGQ PVSGLAHLRQ SIEDILGTPV GSRRMRPEYG SKIRRFVDLP VNDGWKSAVQ 
AEVARSLGRW EPRLRLERVR VIAVLNGQVT LEVQGTYLGD NAVLEVTA