Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_3392 |
Symbol | |
ID | 1185052 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | - |
Start bp | 3832938 |
End bp | 3833702 |
Gene Length | 765 bp |
Protein Length | 254 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 637394743 |
Product | hypothetical protein |
Protein accession | NP_793175 |
Protein GI | 28870556 |
COG category | [R] General function prediction only |
COG ID | [COG3499] Phage protein U |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGTTGGCC CCTTGAATGG GGCCATCGGC GATATCACCG GGGCGGCTTC AGAGCTGGAG AACATCCCTT TCATCGGTCC GGCCATAGGC GCGAAGTTGC AGCGCACCAT GCGTGGCATC AATGTCGCGC AGGCAAAGGT CGGTCAGGTG GTGGCGATGT ACGGGCGTGC GACCAGCGCG GTTTCCCAGG TGCAAGAGCG TATTGGCACA CTGAAAGAGC AAGCGTCCAA GGCAAGTGCG GCAATCAATC GGGTTGCCGG GAAGATCAGC CCGTCTCTGG GCAACATCGT GCCCACCGGC AGTTTTGCCT CGCAGGCCAC ACCGGCCCCG GAAGCGGTAA AGCCGTTTCC GCACCTGTTG ATTATTCAGC CGCTCAAGCC CGAGGCGCAG CCTTACTACT TCAACCTGGA CACGGCGGCA TTTGACGAAC TGCGCAGACA GACTGCGTTC CGCTGGGCCG GGCAAGAACG TCTGACACGC AGCATTGCGC AACAGGCGGT TGGGCTCGGC GACGACAAGC TGAGTTTGAA AGGGTCCATC TTTCCGGGCT TCAAAGGTGG GCTCAAGCAA CTGAACACCC TGCGCAGCAT GGGTCGCAAT CTGCAACCGC TCAGCCTTAC AACGGGCTAT GGCGAGGTGC TGGGCAACTG GTGCCTGCTG AGTGTGGATG AAGAACAGAG CAACCTGCTG GCTGGGGGCA TCCCTCGCAA GCAGGGCTTT TCATTGGAGT TTGTAAGCTA TGGCGACGAT CTGCAGAACG TCTGA
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Protein sequence | MVGPLNGAIG DITGAASELE NIPFIGPAIG AKLQRTMRGI NVAQAKVGQV VAMYGRATSA VSQVQERIGT LKEQASKASA AINRVAGKIS PSLGNIVPTG SFASQATPAP EAVKPFPHLL IIQPLKPEAQ PYYFNLDTAA FDELRRQTAF RWAGQERLTR SIAQQAVGLG DDKLSLKGSI FPGFKGGLKQ LNTLRSMGRN LQPLSLTTGY GEVLGNWCLL SVDEEQSNLL AGGIPRKQGF SLEFVSYGDD LQNV
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