Gene PSPTO_3392 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_3392 
Symbol 
ID1185052 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand
Start bp3832938 
End bp3833702 
Gene Length765 bp 
Protein Length254 aa 
Translation table11 
GC content60% 
IMG OID637394743 
Producthypothetical protein 
Protein accessionNP_793175 
Protein GI28870556 
COG category[R] General function prediction only 
COG ID[COG3499] Phage protein U 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTTGGCC CCTTGAATGG GGCCATCGGC GATATCACCG GGGCGGCTTC AGAGCTGGAG 
AACATCCCTT TCATCGGTCC GGCCATAGGC GCGAAGTTGC AGCGCACCAT GCGTGGCATC
AATGTCGCGC AGGCAAAGGT CGGTCAGGTG GTGGCGATGT ACGGGCGTGC GACCAGCGCG
GTTTCCCAGG TGCAAGAGCG TATTGGCACA CTGAAAGAGC AAGCGTCCAA GGCAAGTGCG
GCAATCAATC GGGTTGCCGG GAAGATCAGC CCGTCTCTGG GCAACATCGT GCCCACCGGC
AGTTTTGCCT CGCAGGCCAC ACCGGCCCCG GAAGCGGTAA AGCCGTTTCC GCACCTGTTG
ATTATTCAGC CGCTCAAGCC CGAGGCGCAG CCTTACTACT TCAACCTGGA CACGGCGGCA
TTTGACGAAC TGCGCAGACA GACTGCGTTC CGCTGGGCCG GGCAAGAACG TCTGACACGC
AGCATTGCGC AACAGGCGGT TGGGCTCGGC GACGACAAGC TGAGTTTGAA AGGGTCCATC
TTTCCGGGCT TCAAAGGTGG GCTCAAGCAA CTGAACACCC TGCGCAGCAT GGGTCGCAAT
CTGCAACCGC TCAGCCTTAC AACGGGCTAT GGCGAGGTGC TGGGCAACTG GTGCCTGCTG
AGTGTGGATG AAGAACAGAG CAACCTGCTG GCTGGGGGCA TCCCTCGCAA GCAGGGCTTT
TCATTGGAGT TTGTAAGCTA TGGCGACGAT CTGCAGAACG TCTGA
 
Protein sequence
MVGPLNGAIG DITGAASELE NIPFIGPAIG AKLQRTMRGI NVAQAKVGQV VAMYGRATSA 
VSQVQERIGT LKEQASKASA AINRVAGKIS PSLGNIVPTG SFASQATPAP EAVKPFPHLL
IIQPLKPEAQ PYYFNLDTAA FDELRRQTAF RWAGQERLTR SIAQQAVGLG DDKLSLKGSI
FPGFKGGLKQ LNTLRSMGRN LQPLSLTTGY GEVLGNWCLL SVDEEQSNLL AGGIPRKQGF
SLEFVSYGDD LQNV