| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_3390 |
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| Symbol | |
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| ID | 1185050 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | - |
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| Start bp | 3831622 |
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| End bp | 3832665 |
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| Gene Length | 1044 bp |
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| Protein Length | 347 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 637394741 |
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| Product | tail protein D |
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| Protein accession | NP_793173 |
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| Protein GI | 28870554 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3500] Phage protein D |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.231627 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGCCTG CATTCCGAAT CGTTGCAGAC CGCACCGACA TCACGGCACT GATCAATGAC
CGTTTGTTGC TGCTTCGGAC AAGTGACAAG CCAGGCATGG AGTCTGATGA GTTTGAGCTG
CGCATCGACG ACCGTGACGG CGCGGTCTCC CTGCCTTCAC GCGGTGCAGA CATCGAGATT
TACCTGGGCT ACGAAGGGCA GCCACTGACG CGGCTGGGGC TTTACACCGT GGATGACATT
GAGTTGTCCG GGCCTCCCGA TACTTTGGTC ATTCGCGGCA AGGCCAGCGA TATGCGTGGC
AGCGGCAGGA CCACTCGTTC TGGTAGTTGG GAAGACGTCT CGCTGCAGCA GATCGTGAAT
GACGTTGCGA CACGAAATAG CTGGAAGCCT GTCTGTAACG TCGCAACGAA GGTGCCCCGC
GCTGATCAGC TTGACGAGTC TGACTACAAC TTCATTACCC GGCTGGCCAA GAAGCACGAC
TGCACCGCGA AAGTCGCAGA CGGCAAGCTG TTGGTGCTGC CACGCCAAGG CGGTGAGAGC
GCAAGTGGTA AGGCATTGGG CGTTGTGACG ATTCAAAGGC ATGACGTGGC GCGCTGGCAG
TTTCGCCTGA GTGACAAGAC CACGCAAAAA GCCGTACAGA CCAAGCATCA GGACAAGAAA
ACGGGAAAGC TGAAGGTCGT TGAGCTGACC AACGATCAGT CACCTGACGG CCTTCCTCCC
GTTCACACCG ACCGCCACAT CTACCCGAAC AAATCTGCTG CAGAGCAGGC AGCGAAGGCG
CGCCTTGCCG CATTCAATCG CAGCACCGCA GGCGTCCGGT TGGAAATGGC CGGGCGTATC
GACCTGTTCG CCGAGCGGAT GGTCGACGCT CAGGGCTTCA AGGTCGGTCT GGATGGTGAA
TACCTGGTCG ACTCGGTTGA ACAAGTATTT ACCCAGTCCG GCTGGACCAC CACGGTGGAG
TGCAACGGCG GCAAGTCCGG GAAAGCCAAA GCGAAGGGCA AGAAAAAGAA AGAGAAGAAA
CCGGTCAAGG TTGTACAGCT TTAA
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| Protein sequence | MKPAFRIVAD RTDITALIND RLLLLRTSDK PGMESDEFEL RIDDRDGAVS LPSRGADIEI
YLGYEGQPLT RLGLYTVDDI ELSGPPDTLV IRGKASDMRG SGRTTRSGSW EDVSLQQIVN
DVATRNSWKP VCNVATKVPR ADQLDESDYN FITRLAKKHD CTAKVADGKL LVLPRQGGES
ASGKALGVVT IQRHDVARWQ FRLSDKTTQK AVQTKHQDKK TGKLKVVELT NDQSPDGLPP
VHTDRHIYPN KSAAEQAAKA RLAAFNRSTA GVRLEMAGRI DLFAERMVDA QGFKVGLDGE
YLVDSVEQVF TQSGWTTTVE CNGGKSGKAK AKGKKKKEKK PVKVVQL
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